Gene Caci_6812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6812 
Symbol 
ID8338176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7866139 
End bp7867383 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content74% 
IMG OID644959901 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003117494 
Protein GI256395930 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCTC GCAAGTCTGT CGTCGTCACC GGGGTCGGTG CGACCACGCC TCTCGGCGGG 
GACGCCGCCT CGTTCTGGGA CGGGTTGCTG GCCGGACGCT CCGGAGTGCG CAACCTGACT
GAAGAGTGGG CCGAGCAGCT GCCAGTGCGC TTCGCCGCCC GGGTCGCCGT CGAGCCCTCG
GCGCACCTGA AGCCGGTGGA GATCCGCCGC CTGGACCGCT CGGCGCAGTT CGCGCTGATC
GCGGCCCGCG AGGCCTGGAA GGACGCCGGG TTCGAGGGCA AGTCCGCCGA GCCCAACCGG
CTGGGCGTGA TGGTCGGCTC CGGCATCGGC GGGGTCACCA CCTTGCTGAG CGCCTACGAC
GACCTGCTCG CCAAGGGCCC GCGCTCGGTC GGCCCGCGCA CGGTCCCGAT GCTCATGCCG
AACTCCCCGG CGGCCTACGT CGGCCTGGAG TTCGACGCCC GCGCCGGCGT GCACGCGCCG
GTCTCGGCCT GCGCCACCGG CGCCGAGGCG GTCGGCCACG CCATCGAGAT GATCCGCTCC
GGCCGCGCCG ACGTGGTGCT GGCCGGCGGC ACCGAGGCCG CCATCCACCC GCTGCCGATC
GCCGCCTTCG CCAACATGAT GGCGATGTCC AAGCGCAACG ACGACCCGCA GCACGCCTCC
CGGCCCTTCG ACGTCGGCCG CGACGGCTTC GTGCTCGGCG AGGGCGCCGG CATCCTGGTC
CTGGAGTCGG CCGAGCACGC CGCCGCGCGC GGCGCCCGGG TCTACGCCGA GGCCGCCGGC
GTCGGCTTCT CCGCGGACTC CCACGACATC GCCCAGCCCG AGCCGGACGG CCGCGGCGTC
GCCGAGGCGC TGGCCTTCGC GCTGGAGGAC GCCGACCTGA CCCCCGGCGA CGTCCGGCAC
CTGAACGCGC ACGCCACCAG CACCCCGCGC GGCGACCTCG CCGAGATCAT GGCCTTCCGG
AAGATCCTGG GCTCGGCCGC CGAGGACGTC GCGGTCTCGG CCACCAAGTC GATGCACGGC
CACCTGCTCG GCGGCACCGG CGCGATCGAG TCGGTGGCGA CCGTCCTGGC CCTGCACCAC
CGCCAGGCGC CGCCGACGAT CAACATCGAA GAGCTGGACC CCGAGGTCAC CCTGGACATC
GTCCGCGACA AGCCGCGGGC CCTGCCCGAG GGCCAGATCG CGGCGCTGAA CGACTCCTTC
GGGTTCGGCG GGCACAACGT GGTCGTGGCC TTCAAGTCGG TCTGA
 
Protein sequence
MTARKSVVVT GVGATTPLGG DAASFWDGLL AGRSGVRNLT EEWAEQLPVR FAARVAVEPS 
AHLKPVEIRR LDRSAQFALI AAREAWKDAG FEGKSAEPNR LGVMVGSGIG GVTTLLSAYD
DLLAKGPRSV GPRTVPMLMP NSPAAYVGLE FDARAGVHAP VSACATGAEA VGHAIEMIRS
GRADVVLAGG TEAAIHPLPI AAFANMMAMS KRNDDPQHAS RPFDVGRDGF VLGEGAGILV
LESAEHAAAR GARVYAEAAG VGFSADSHDI AQPEPDGRGV AEALAFALED ADLTPGDVRH
LNAHATSTPR GDLAEIMAFR KILGSAAEDV AVSATKSMHG HLLGGTGAIE SVATVLALHH
RQAPPTINIE ELDPEVTLDI VRDKPRALPE GQIAALNDSF GFGGHNVVVA FKSV