Gene Caci_6802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6802 
Symbol 
ID8338166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7853773 
End bp7854492 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID644959891 
ProductYhhN family protein 
Protein accessionYP_003117484 
Protein GI256395920 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCTCA CATTGACGCT GCTCACCCTG CTTGTCGCCC TCGCGGACTG GATCGCCGTA 
TCGCGGCGCG CCATGGACCC GACCTCGGTC GGCGCGCGCC ACGCGGAGTA TGTCGCCAAG
CCGCTGACCA TGGTCTTTCT GATCGGCGCG GCACTGGCCA TCGCGGACGC GCACGCCAGG
TCCGGCATCC CCGGCCCGCA CCGCGCCACG GCGTACCTCA CGATCGCCGC GGTCGCGGCG
CTGGTACTCA GCGCGATCGG CGACGTCTTC CTGATGCTGC CGGAGGACTC GTCGGCTGCC
GACCGGAACT TCGTGATCGG ACTGGGAGCG TTCCTGCTCG CGCACGTCGC CTACATCGCG
GCCTTCGTGC GGCTGCACGC TCACGGCGGC TACGCGATCT CCTTCGTGGT GACCGGACTG
GTCCTGGCCG GGGCGATGTT CGCGACGGTC GGTCTGCGGA TCCGGCGCGC GGCCGGTGAG
GAGGATCCCG CGCTGGCCGT CCCGGTTCTG GCCTACGTCA GCGTCATCTC GGTGCTGGTG
GTCGCGGCGT GGTGGACCGG CGACCTGCGC ATCATCCCCG GTGCGCTGCT GTTCGCGGTG
TCCGACACGA TGATCGGCTG GACCCGGTTC GTGCGCAAGG ACTGGGAGCT GGACGTGCCG
ATCATCGTCA CCTACCACCT GGCGCAGATC CTGCTGGTAC TCGGTCTGGT TCGCAGGTAG
 
Protein sequence
MPLTLTLLTL LVALADWIAV SRRAMDPTSV GARHAEYVAK PLTMVFLIGA ALAIADAHAR 
SGIPGPHRAT AYLTIAAVAA LVLSAIGDVF LMLPEDSSAA DRNFVIGLGA FLLAHVAYIA
AFVRLHAHGG YAISFVVTGL VLAGAMFATV GLRIRRAAGE EDPALAVPVL AYVSVISVLV
VAAWWTGDLR IIPGALLFAV SDTMIGWTRF VRKDWELDVP IIVTYHLAQI LLVLGLVRR