| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6741 |
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| Symbol | |
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| ID | 8338105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7776254 |
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| End bp | 7780690 |
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| Gene Length | 4437 bp |
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| Protein Length | 1478 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959834 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003117427 |
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| Protein GI | 256395863 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.692029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTTGC TGGGGCGTGG ACGAGGGACG GACCCGCAGT GGATCACCCA GGAGTTCGCT
AAGGCGGAGG ACCTGGCGGC TGTGGGTCAG CAGGAGCGGG CTCGCGACCG ATACGCGCGC
CTGGCCCGCC GTCTGTCCTC CGTGCCCGAA GACCTGCAGC ACTATCGCGG TCTGGCATTG
CTCGGCGAGG CCGAGACCAT TCTGGCGCTG GGTATCTTCA CCGACGCCAT GGCGCGCTTC
CGCGAGGCCT ACCCGCTGCT GACCGAGCCC TTCCGGCAGC TGCCGCGCTG GCTTGTGCGG
CAGTTCGCCG AGGAGCGGCT GCGCGCCGAG GACGGCGACC TCAAGCCGAT CATCGACTTC
CTGAAGGCGA TCACCTACGG CCTGGAGCCG GGTGATGAGG ACACAGCCAT CCGCACCGTC
ATGTGGCTGC AGAAGGCCTG CACCACCGGA CCCACCGCGC AGCGCGAGGC CACCGCGCGC
GCCGCGCTGG CCGCGCTGCC CGGCGTGGAC TGGCCGGTGC TGGCGCTGAC CACGATGATG
CGCCGCGACG GCCGGGTGAA GGAGGCCGAG GACCTGCTCG CCGCCGCCGT GCCCGGCGGC
AGCGGCGAGC TGTGGTTCCG CTGGGGCATC CAGCTCAGCA CCCTGCTGCG CTACGACGAC
GCGATCTCCG CCTACGACGA GGCGTTCCGC CGCGGCACCG GCCCGGCTTC GCCGTGGTCG
CGCGGAGCCT GGCTGCGCCC CGAGGCGCTG CTGTTCCGCG GGCTGGCGCA CCAGCAGATG
GGGCGCACCG ACCAGGCCGA GACCGACCTG CGCACCGCCT CGCAGTACGC GCCGCAGGAT
CCGCGCATCC ACTACTCGCT GGGCCGGCTC GCCGTGCAAC TCGGCGCCGA CGATTTGGCG
TGGAACCACT TCAGCAACTC CCTGGCGGTC GAGGCGGCCT TCGCCCCGGC ACGGCTCGGC
TTGGCGCTGC TGCGCGAGCA GTCCGGACGC CCCGCCGAGG CGATCGCGCA CTACCAGGCG
GCGCTGCGGC ACGACGCGCA TTCGCGCGCC GCGCGCATTC GGCTCGGTGC CGTACTGCTG
GCCGCCGGAC GCCGCAAAGA GGCGCAAGGC CTGCTGGAGC CGGAGTCCGG ACAGTCGTCC
TACTGGGGCG GCATGGCCAC GTTCCACTAC GGCTTGGCGC AGCTGCGTGC CAACAACCCG
GCCGGCGCCA TCGACACCTG GGACCGGCTC GGCACCACCG AACTGCGGGA CTGGACCGCC
GTGGCGCGGG ATCGCGAAGC GCGCAAGCGC CTCGGCAGCG ACCCGACCGC CGCGCGGTTG
CAGTGGCAGA TCGCGTATCT GGACTCGCCG GAGGTCATCG AGCACCGGAT AGCGCTGCGG
GAAGCCGCGC TGCGCGAGGC CGCCTGGATG CTGATGTCCG GACGGGAGAT ACCCGACAAC
CGGGAGAAAG CGGCCGTCGC GCTCGACCTG GCCGCCTCGA TGCCGACCGA CTGGCGCGGC
GACGGCACGC GCGGCCGGCA GAACCGGCTG CGGGCGCTGG TCGACCTGGC CGGCGGCACC
ACGACCGACC TGGAGACGTT CCTCGCTCCC GACGGCCGGA TGCGCGACCG CTGCCACCTG
GCTGTGGCGG CGTTGCTGGA CGACCGGATC GAGGACGCCG AGACGCTGCT CGCCGAACTG
CCCGAGGACC CGGACTGCGA CCCGGCGGTC GCCCGGGCGC GTGCGCTGTA CGCCGAGCGG
ACCGGGCACT GGTACGACGC CGTGCAGTGG TACCAGCGCT TTCTGGGCAA CGACATCGCC
AACGGCTCCG CCGCATCGCA GGATGTCGAC GCCGACGCGG ACTCCGGCGC GGACACCGGC
TACGAGCTCC GCGACGACGA CACCCAGAGC CTGGACATCC AGGAGATCGC CAACGCCGGA
CCGCTGGTCG CCGCCGAGCG GCTGGCGGCG GAGGCCGAGC CCGACGACGA GGAGCCGCCG
CTGCCGTGTG TCGCGGTCGC GGACGTCGAG TGCGGGAAGG ACGCGGTCGG CTCGTGTGCC
GGCTGCGGAC GCGAAGGATG CCGGACGCAC CTTTTCCGCC CTTCTGGGCT CAATTCCTAC
CGATGCGAGA AGTGCGCCGG ACCAGCACTG CAATCGCTGC TTTACGCCGC GCGCAAGGCC
GGCGTCCCGG ACGAGGCCGA GCGCACGCTG ACGTCGTGGG CCGATGCCCT GGTCAGCAGT
GCCCTGACTC CGCCGCTGCG CCGCCAGCTC GCGCTGATGC GCGCCGAGGC CGGCGACCTG
GACGGCGCGC TGGTCCGGCT GCCCGCCGAC GTGCAGACCG AGCGCGTCGA GCTGCTCATC
CGGCGCGCGG CGTCGGCGAT CGAGAAGAGC GAGCCCTACC GGGCGCTCGG CGATCTGCGC
AGCGCGCTGC AGATCCAGCC GGACCAGCCC GAGGCGCTGG CCGCGCTGGA GGCTCTGTCG
GAGTACTCCG CGCGTCAGCA TGCTGACGAG GGGCGTCATG AAGAGGCGTT CGCGGGGTAT
CTCGCCTTGG TGCGCGAGGA ACCGACGAAC GCCCGGCTGC TGCACGCGCT CGGGTTGTCC
GCGTACCAGC TGGCTCGGTC CGGAAACAAG GACGAGCACT GGATGTGGAC GATCGGCTGC
CTGGTGACGG CGCTGTACGC GCCCGACTTC TGGACGCAGG TCGTCGGAGT CGGCGACGTC
GAAGCCGATC GCGGGCAGAT CGAGCAGACC CGGCGCACGC TGATCGACGA GTTGAAGAAC
GACCTGCGGT TCGCCGACCT CGCGGCGTAC CGGGGCGGCG ACGAGGTGGA CGCCTGGAGC
GTGCGGCTCG GGATGGACGT GCTCGCCTGC GAGGCGGACC TGCCCGCCTT GAGTCCGATA
CGGATCAGCC CGACGCTGGA GGCGCTGCTG CGTCAGCAGC CTGAGACACC TGCGCTCGCG
GAGTGGCGCG AACTCGCCGA CGCCACGCAC GCGGCGGACT CCGACGGCGC CGAGGACGAC
GAGTCGGTGC GGATCGCCGC GCTGTACGGG CCCTTGGGAC CGCAGCACTT CCTGTATGAG
GACAGCAAGT TCGAGCCGGC CATCGCGGCG CTGGACACGG TCGCCGAGAG CGACCGCGAC
GCGGCGTGGA CCGCGCTGCT GCGCAAGACG CTGGTCATGC GGGGCATGGA GCTGCATCTG
GACGAGCAGT GGGCGCCGGC GCTGGAGTGC ATAGCCCGGG CGGCGTCGCT GGATCCGGAC
CGCAAGCCCG AAGGCGTGTG GGTGGAGATC GCCGCCGAGT CCGGGCTGAA CGCGGCGCGG
GAGCTGATGC GGCGTGCCGA GGAGGGGGAG CGTCCGGTTT CGGTGGACGC GACGCCGACC
GTGAACATGG CGGCGACCAG CACGGCTTTC ATCGCCGACG CGACCAAGAC GGTGAACATC
GCGGCGGCTG GTTTGTCGGG CCTGGCGGCG AGTGCCACTG GTGACAGCGC CAGTGGCGCT
GCTTCTGCTT CTGCTCCTGC TTCTGGCGAC GGGGACGTGC CGGCGCCGGT CAGCGTGTTG
CAGAGCGTGG TGGATGTGTT GGAGCGCGCC TTGTCCGTCG CTCCGGATGT CACGGCGTTG
CAGAGAGAAC TGGGTGTCGC GCATATGCGG CGGACCAGGG AACTGCGTTC CGAGGTGCGG
GATTACGTGC TGGCGCTGTC GCACGCGCGG CGCGCCGTCG AACTGCGGCC GGACGACAAG
GAAGCCGCGG CGCTGCTGGA GGTCGTGCTC GCCGAGCGAG CCGGTGCGCT GACCAAGCCC
GGACCCGACG GCGACCTGCT GGAAGCCGTG CAGTGGTGGC AGGAACTCAG CGAGATGGAC
GGCTCGAAGT CCGAGTACCA CGCCGGGCTG TCGTACGCGC TGAAGCTGCT GGCGTGCTCG
GCGGCGCTCG GTGGACGCCG TGCCCTGGCG GTGGACCGGA TGACGTGGGG GCTGCTGGCC
GACAAGACGT GGACCGGCGA CCCCGACCTG GAGGCGCCGC GGGTGATAGC GACCCTCCTG
ATCGCCGACG CCATGGACGA GCGCACCCAG CGTCCCTTCA ACGACCGCGC GCACCGCCTG
CGCACCGCAC TGGCGTACCG CGACACGAAG GAACTCCGGG ACCTGATGGC CGCACTGTGG
AGGAACGAGG CGACCTTCCA GTGGGAGACC CGCCACTACG GCCTGTGCGC GTCCCTGCTG
GAGGAGGCCG AGGCCCTCGA CTCCGGCAAC GCCAACCCCG ACGCCTCCAC CACCCTGAAC
CTGCGCGTCC CCAGCCCCGA CGACCCCCGC TCCGGAGGCA TGCAACCGTT CCACTGGCAC
CGCTACCCGC GAGCCCGCGC CCTCCTGAAG CGCACAGTGG ACCACTACCC CGACGACGAC
GAACTCCGAG AACTCCACGC CCGAAGCGCC GCCCCCGAAG ACCCCGCGAG CACCTGA
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| Protein sequence | MALLGRGRGT DPQWITQEFA KAEDLAAVGQ QERARDRYAR LARRLSSVPE DLQHYRGLAL
LGEAETILAL GIFTDAMARF REAYPLLTEP FRQLPRWLVR QFAEERLRAE DGDLKPIIDF
LKAITYGLEP GDEDTAIRTV MWLQKACTTG PTAQREATAR AALAALPGVD WPVLALTTMM
RRDGRVKEAE DLLAAAVPGG SGELWFRWGI QLSTLLRYDD AISAYDEAFR RGTGPASPWS
RGAWLRPEAL LFRGLAHQQM GRTDQAETDL RTASQYAPQD PRIHYSLGRL AVQLGADDLA
WNHFSNSLAV EAAFAPARLG LALLREQSGR PAEAIAHYQA ALRHDAHSRA ARIRLGAVLL
AAGRRKEAQG LLEPESGQSS YWGGMATFHY GLAQLRANNP AGAIDTWDRL GTTELRDWTA
VARDREARKR LGSDPTAARL QWQIAYLDSP EVIEHRIALR EAALREAAWM LMSGREIPDN
REKAAVALDL AASMPTDWRG DGTRGRQNRL RALVDLAGGT TTDLETFLAP DGRMRDRCHL
AVAALLDDRI EDAETLLAEL PEDPDCDPAV ARARALYAER TGHWYDAVQW YQRFLGNDIA
NGSAASQDVD ADADSGADTG YELRDDDTQS LDIQEIANAG PLVAAERLAA EAEPDDEEPP
LPCVAVADVE CGKDAVGSCA GCGREGCRTH LFRPSGLNSY RCEKCAGPAL QSLLYAARKA
GVPDEAERTL TSWADALVSS ALTPPLRRQL ALMRAEAGDL DGALVRLPAD VQTERVELLI
RRAASAIEKS EPYRALGDLR SALQIQPDQP EALAALEALS EYSARQHADE GRHEEAFAGY
LALVREEPTN ARLLHALGLS AYQLARSGNK DEHWMWTIGC LVTALYAPDF WTQVVGVGDV
EADRGQIEQT RRTLIDELKN DLRFADLAAY RGGDEVDAWS VRLGMDVLAC EADLPALSPI
RISPTLEALL RQQPETPALA EWRELADATH AADSDGAEDD ESVRIAALYG PLGPQHFLYE
DSKFEPAIAA LDTVAESDRD AAWTALLRKT LVMRGMELHL DEQWAPALEC IARAASLDPD
RKPEGVWVEI AAESGLNAAR ELMRRAEEGE RPVSVDATPT VNMAATSTAF IADATKTVNI
AAAGLSGLAA SATGDSASGA ASASAPASGD GDVPAPVSVL QSVVDVLERA LSVAPDVTAL
QRELGVAHMR RTRELRSEVR DYVLALSHAR RAVELRPDDK EAAALLEVVL AERAGALTKP
GPDGDLLEAV QWWQELSEMD GSKSEYHAGL SYALKLLACS AALGGRRALA VDRMTWGLLA
DKTWTGDPDL EAPRVIATLL IADAMDERTQ RPFNDRAHRL RTALAYRDTK ELRDLMAALW
RNEATFQWET RHYGLCASLL EEAEALDSGN ANPDASTTLN LRVPSPDDPR SGGMQPFHWH
RYPRARALLK RTVDHYPDDD ELRELHARSA APEDPAST
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