Gene Caci_6671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6671 
Symbol 
ID8338035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7686199 
End bp7687122 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID644959765 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003117358 
Protein GI256395794 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGG TCGTCACAGG AGGCTGCGGG TTCATCGGTT CGCACGTCGT GGACCAGCTC 
GTCGAGGCCG GCCACGAGGT CGTGGTCGTG GACAGCGTGA TCCGCAAGCT CAACCCCGCC
GCCGAGTACC GCCAGGCCGA CATCCTGGAC CTGGCCGGCC TGACCGCCGC GCTGGACGGC
GGCGAGGTGG TCTTCCACCT CGCCGCCGCC GCCGACGTCG AACAGGTCAC CGCCGATCCG
GTGCGGGCGC TGCGGCTCAA CGTCGAGGGC ACCGGCACCG CCCTGGAGGC CGCGCGGCGC
ACCGGCATGA ACCGCTTCGT GCTGGCCAGC ACGGTCTGGG TCTACGGCGC CGCGCACACC
GACAGCGAGG GCGCCGCCGC CGAGCTCACC GAGGACGTGC CCTTCGATCT GCGCCGCAGC
GGGCACCTGT ACGTCGCGAC CAAGCTCGCC GCCGAGATGG CCGTGCAGAG CTACCGCGAG
CTGTACGGCC AGCACTTCAC GATCCTGCGC TACGGCATCC CCTACGGCCC GCGCATGCGC
GACGCCCTGG TCATCGCCAA GTTCGTGCAG GCGGCGCTGG CCGGACAGCC GATCACCATC
GCCGGCGAGG GCCGCCAGAC GCGCAACTAC GTCTACGTCC GCGACCTGGC CGCCGCGCAC
GTCCTCGCGC TGTCCCCGAC CGCCGAGGAC GAGACCATCG CCCTGGAGGG CACGACCCCG
ATCTCGGTCC GGCACATCGC CGACACCGTC GACGGACTGC TCGGCCCGAT CACCGTCCAA
CAGGTCCCGG CGCGCGCCGC GGACTACGCG GGCACCCGCA TCTCCAACGC CAAGGCCAAA
CGGCTGCTGG GCTGGTCGCC GACCACCGGG TTCACCGAGG GTGTGCGGCG CTACGTCGAG
TGGTACCGGG CCGAGGCGCG CTGA
 
Protein sequence
MRTVVTGGCG FIGSHVVDQL VEAGHEVVVV DSVIRKLNPA AEYRQADILD LAGLTAALDG 
GEVVFHLAAA ADVEQVTADP VRALRLNVEG TGTALEAARR TGMNRFVLAS TVWVYGAAHT
DSEGAAAELT EDVPFDLRRS GHLYVATKLA AEMAVQSYRE LYGQHFTILR YGIPYGPRMR
DALVIAKFVQ AALAGQPITI AGEGRQTRNY VYVRDLAAAH VLALSPTAED ETIALEGTTP
ISVRHIADTV DGLLGPITVQ QVPARAADYA GTRISNAKAK RLLGWSPTTG FTEGVRRYVE
WYRAEAR