Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6614 |
Symbol | |
ID | 8337978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7625080 |
End bp | 7625625 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959708 |
Product | protein of unknown function DUF1470 |
Protein accession | YP_003117301 |
Protein GI | 256395737 |
COG category | [R] General function prediction only |
COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.216738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGATTCG AGTTCGTCGC CGGCCATGTG GTGCTCGACT ACGTCGCGAC CGTCGCGGAG CGCACCACGA CCCGCCTCGA GCGCCTCAGC ACGCCTGAGG ACCTGGCGGA CTGGCTGGTC AAGGCCCGTG TCGTCGATAC ACCACCGACG GCGGGCGAAG CCGACCTGCT CGCGGCGCGC CAGCTCCGCG AGTCCCTCTA CACCCTGGTG GTCAGCCTCA CCGGCGGGTC CGCGCTCACT CCAGCGGTGC GCGAGACACT CACCCGATTC GCTGCCCACG ACGGCCCACG GCTGTCCATC GACGCACACG GGAACGTGCA CAGAACAGGG ACCGTGACGC AGGCCTTGGC TCTTCTGGCA CAGGAAGGCC TGCTACTGGC TCGGGACGAA CAGCACGACA GCATCCGCTG GTGCGCCGCG CCCACCTGCA CCCGGCCGTT TCTGGATCGG AGCCACGCGC GCCGACGCCG CTGGTGCGGC ATGAGCACCT GCGGCGACAA GGCCAAAGCT GCGGCGTACC GCGCCAGGCG GGCCAACGGG GCGTGA
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Protein sequence | MRFEFVAGHV VLDYVATVAE RTTTRLERLS TPEDLADWLV KARVVDTPPT AGEADLLAAR QLRESLYTLV VSLTGGSALT PAVRETLTRF AAHDGPRLSI DAHGNVHRTG TVTQALALLA QEGLLLARDE QHDSIRWCAA PTCTRPFLDR SHARRRRWCG MSTCGDKAKA AAYRARRANG A
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