Gene Caci_6614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6614 
Symbol 
ID8337978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7625080 
End bp7625625 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID644959708 
Productprotein of unknown function DUF1470 
Protein accessionYP_003117301 
Protein GI256395737 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.216738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATTCG AGTTCGTCGC CGGCCATGTG GTGCTCGACT ACGTCGCGAC CGTCGCGGAG 
CGCACCACGA CCCGCCTCGA GCGCCTCAGC ACGCCTGAGG ACCTGGCGGA CTGGCTGGTC
AAGGCCCGTG TCGTCGATAC ACCACCGACG GCGGGCGAAG CCGACCTGCT CGCGGCGCGC
CAGCTCCGCG AGTCCCTCTA CACCCTGGTG GTCAGCCTCA CCGGCGGGTC CGCGCTCACT
CCAGCGGTGC GCGAGACACT CACCCGATTC GCTGCCCACG ACGGCCCACG GCTGTCCATC
GACGCACACG GGAACGTGCA CAGAACAGGG ACCGTGACGC AGGCCTTGGC TCTTCTGGCA
CAGGAAGGCC TGCTACTGGC TCGGGACGAA CAGCACGACA GCATCCGCTG GTGCGCCGCG
CCCACCTGCA CCCGGCCGTT TCTGGATCGG AGCCACGCGC GCCGACGCCG CTGGTGCGGC
ATGAGCACCT GCGGCGACAA GGCCAAAGCT GCGGCGTACC GCGCCAGGCG GGCCAACGGG
GCGTGA
 
Protein sequence
MRFEFVAGHV VLDYVATVAE RTTTRLERLS TPEDLADWLV KARVVDTPPT AGEADLLAAR 
QLRESLYTLV VSLTGGSALT PAVRETLTRF AAHDGPRLSI DAHGNVHRTG TVTQALALLA
QEGLLLARDE QHDSIRWCAA PTCTRPFLDR SHARRRRWCG MSTCGDKAKA AAYRARRANG
A