Gene Caci_6581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6581 
Symbol 
ID8337945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7587602 
End bp7589278 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content71% 
IMG OID644959675 
Producthypothetical protein 
Protein accessionYP_003117268 
Protein GI256395704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.939663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGC AGCCACGGCC GTCACCGTCG CCGACCGCCC AGGCACTGGC GGTCCATGTC 
TTCTTCTCCG CTGAGGGCGA ACACGCCCGA GCCTCCTACG CGCGCTTACG CGACCTATGG
ACGGCCTGCG GTGATTCGCT CGGCATGACG ACGCCGGTCC CGCGGCTCGG TATGCCCGTC
GAACTGCCGC CGACCTTGGC CGCGCCGTCC GTCCTCGGAC CGGCGGCCGC GCGCCAATCG
GTCGCGGAGG GGATCGTGCA GGCTTTCGTC GTCCGCGAGC GCGACGTCTA CTGCCTCGCC
GTCATGATCG CCCCCGATGC GGCCGAGCGG CTCGGGTGGA GCGAGTTGGA GGCACGGTGG
TCGGCGGTGG TGACGGCAGG AGCAAGCGCG GGTGCGGGCA CGCCGAACGC TGTCCCGCTG
GGCGAGGCCC GGCTCTTCCT TGCCCTGGTC AACACCATGC CCGACGGCGT CGCCGCACCT
TCCGGAGTAC GGGAGGCCAT GCCTCAGCAT CCTGATACGG ACGAGGCTTG GTGGCGGCGC
GGCCATCGCA CCGACTCGGG TCTGCTCCTG TGGGAGACCG CCTCGCGCCC CGACGACCGA
GCTGTGCGCC GCTTCGCCGT CGTGGCCTCT CGCCGCGACG AGAAGCTGAT GGACGCCTGG
GTGTGGACGC GCGGCGAGGC TGAGGTGCCG CCGTTCGGGC GCTATCTGAT GCACATGGCG
AAGATCCGTC ATGAGCTGCG CATCCATGCC GGCGGCGACG CTGTGCGCCG ACTGCGCACG
GAGGCGGACA GCCGGGTGGA ACGTCTGCTG CAGCTGTTGG AGGGCGAGAT CCCGGCCGGG
CCCGCGGAGC TGGTCGCGGC CTCGACACGG CTGGCTGTAC TACGGGTGCA GTCGGCGGGG
CTGATCGCCG CGCTGACCAG GCTGCGCGAG ATGCGGCGGA CGGTACAGAT CGCGCAGTGG
AACATGGCGG CTGCGCTCGG CGAGGACGGC GGAATAGAAG GTCAAGCCTC GGCGGTCAGC
GGACCTGGAC ACATCAGAGC TCGCGCGAGT GACAACGAAG TCGGCGGGCC TGTGTCTGGC
CGGCCTGGCA CGACGGGCAG CCGACCCGGC ACTCCCCCGG CCACCCCGCT CACCGACGAC
CGAGCACTGG CCGACTGGTT CGCGACCCGT CTCGACGACG ACGCCCTGTA CGTGGCGGCG
GCGTGCGATC GCACCCGCGA CGTCGCGGAG ATCACCGCGA CGGTCGTCGA GCACGGCCTG
CACGAGCACC GACAGGCCGC CGAGGACCAC CGCGACCGTT TCAGCCTGCT CCAGACGGCG
ATCATCGGAG CCGTGCTCAT GGTCCTGACC GCGGTGCAGG CGCTCGGCTA CCGGGTCCCC
GTGTCGGGAC CGGTCAAAGC CCCGCTCGTC GCGGTCCTCG GCGCCGTGAC CCTGTTCCTG
GCCGCGTTCG TCCTGCGTTT GGCCACCGCG TCCGACCACC GCCCGCAGGC CTTGCTCAGC
CATATCGCCG CCGGCCTGAG CGGCGCCGCG CTGGTCTGGT TGCTCGTCGC GATCGGCTGG
ACCGAGCAGG CCCACCACAG CTCGCCGCGC GGCCTGACCT GTCTGGTGTC AGGATTCGGA
TTCGTCGTCG GGGTAGCAGT CGCCCGCCTG CTGTCCCGCC GCGGTCTCGC CGCTTAG
 
Protein sequence
MTPQPRPSPS PTAQALAVHV FFSAEGEHAR ASYARLRDLW TACGDSLGMT TPVPRLGMPV 
ELPPTLAAPS VLGPAAARQS VAEGIVQAFV VRERDVYCLA VMIAPDAAER LGWSELEARW
SAVVTAGASA GAGTPNAVPL GEARLFLALV NTMPDGVAAP SGVREAMPQH PDTDEAWWRR
GHRTDSGLLL WETASRPDDR AVRRFAVVAS RRDEKLMDAW VWTRGEAEVP PFGRYLMHMA
KIRHELRIHA GGDAVRRLRT EADSRVERLL QLLEGEIPAG PAELVAASTR LAVLRVQSAG
LIAALTRLRE MRRTVQIAQW NMAAALGEDG GIEGQASAVS GPGHIRARAS DNEVGGPVSG
RPGTTGSRPG TPPATPLTDD RALADWFATR LDDDALYVAA ACDRTRDVAE ITATVVEHGL
HEHRQAAEDH RDRFSLLQTA IIGAVLMVLT AVQALGYRVP VSGPVKAPLV AVLGAVTLFL
AAFVLRLATA SDHRPQALLS HIAAGLSGAA LVWLLVAIGW TEQAHHSSPR GLTCLVSGFG
FVVGVAVARL LSRRGLAA