Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6581 |
Symbol | |
ID | 8337945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7587602 |
End bp | 7589278 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959675 |
Product | hypothetical protein |
Protein accession | YP_003117268 |
Protein GI | 256395704 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.939663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGC AGCCACGGCC GTCACCGTCG CCGACCGCCC AGGCACTGGC GGTCCATGTC TTCTTCTCCG CTGAGGGCGA ACACGCCCGA GCCTCCTACG CGCGCTTACG CGACCTATGG ACGGCCTGCG GTGATTCGCT CGGCATGACG ACGCCGGTCC CGCGGCTCGG TATGCCCGTC GAACTGCCGC CGACCTTGGC CGCGCCGTCC GTCCTCGGAC CGGCGGCCGC GCGCCAATCG GTCGCGGAGG GGATCGTGCA GGCTTTCGTC GTCCGCGAGC GCGACGTCTA CTGCCTCGCC GTCATGATCG CCCCCGATGC GGCCGAGCGG CTCGGGTGGA GCGAGTTGGA GGCACGGTGG TCGGCGGTGG TGACGGCAGG AGCAAGCGCG GGTGCGGGCA CGCCGAACGC TGTCCCGCTG GGCGAGGCCC GGCTCTTCCT TGCCCTGGTC AACACCATGC CCGACGGCGT CGCCGCACCT TCCGGAGTAC GGGAGGCCAT GCCTCAGCAT CCTGATACGG ACGAGGCTTG GTGGCGGCGC GGCCATCGCA CCGACTCGGG TCTGCTCCTG TGGGAGACCG CCTCGCGCCC CGACGACCGA GCTGTGCGCC GCTTCGCCGT CGTGGCCTCT CGCCGCGACG AGAAGCTGAT GGACGCCTGG GTGTGGACGC GCGGCGAGGC TGAGGTGCCG CCGTTCGGGC GCTATCTGAT GCACATGGCG AAGATCCGTC ATGAGCTGCG CATCCATGCC GGCGGCGACG CTGTGCGCCG ACTGCGCACG GAGGCGGACA GCCGGGTGGA ACGTCTGCTG CAGCTGTTGG AGGGCGAGAT CCCGGCCGGG CCCGCGGAGC TGGTCGCGGC CTCGACACGG CTGGCTGTAC TACGGGTGCA GTCGGCGGGG CTGATCGCCG CGCTGACCAG GCTGCGCGAG ATGCGGCGGA CGGTACAGAT CGCGCAGTGG AACATGGCGG CTGCGCTCGG CGAGGACGGC GGAATAGAAG GTCAAGCCTC GGCGGTCAGC GGACCTGGAC ACATCAGAGC TCGCGCGAGT GACAACGAAG TCGGCGGGCC TGTGTCTGGC CGGCCTGGCA CGACGGGCAG CCGACCCGGC ACTCCCCCGG CCACCCCGCT CACCGACGAC CGAGCACTGG CCGACTGGTT CGCGACCCGT CTCGACGACG ACGCCCTGTA CGTGGCGGCG GCGTGCGATC GCACCCGCGA CGTCGCGGAG ATCACCGCGA CGGTCGTCGA GCACGGCCTG CACGAGCACC GACAGGCCGC CGAGGACCAC CGCGACCGTT TCAGCCTGCT CCAGACGGCG ATCATCGGAG CCGTGCTCAT GGTCCTGACC GCGGTGCAGG CGCTCGGCTA CCGGGTCCCC GTGTCGGGAC CGGTCAAAGC CCCGCTCGTC GCGGTCCTCG GCGCCGTGAC CCTGTTCCTG GCCGCGTTCG TCCTGCGTTT GGCCACCGCG TCCGACCACC GCCCGCAGGC CTTGCTCAGC CATATCGCCG CCGGCCTGAG CGGCGCCGCG CTGGTCTGGT TGCTCGTCGC GATCGGCTGG ACCGAGCAGG CCCACCACAG CTCGCCGCGC GGCCTGACCT GTCTGGTGTC AGGATTCGGA TTCGTCGTCG GGGTAGCAGT CGCCCGCCTG CTGTCCCGCC GCGGTCTCGC CGCTTAG
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Protein sequence | MTPQPRPSPS PTAQALAVHV FFSAEGEHAR ASYARLRDLW TACGDSLGMT TPVPRLGMPV ELPPTLAAPS VLGPAAARQS VAEGIVQAFV VRERDVYCLA VMIAPDAAER LGWSELEARW SAVVTAGASA GAGTPNAVPL GEARLFLALV NTMPDGVAAP SGVREAMPQH PDTDEAWWRR GHRTDSGLLL WETASRPDDR AVRRFAVVAS RRDEKLMDAW VWTRGEAEVP PFGRYLMHMA KIRHELRIHA GGDAVRRLRT EADSRVERLL QLLEGEIPAG PAELVAASTR LAVLRVQSAG LIAALTRLRE MRRTVQIAQW NMAAALGEDG GIEGQASAVS GPGHIRARAS DNEVGGPVSG RPGTTGSRPG TPPATPLTDD RALADWFATR LDDDALYVAA ACDRTRDVAE ITATVVEHGL HEHRQAAEDH RDRFSLLQTA IIGAVLMVLT AVQALGYRVP VSGPVKAPLV AVLGAVTLFL AAFVLRLATA SDHRPQALLS HIAAGLSGAA LVWLLVAIGW TEQAHHSSPR GLTCLVSGFG FVVGVAVARL LSRRGLAA
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