| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6566 |
|---|
| Symbol | |
|---|
| ID | 8337930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7559926 |
|---|
| End bp | 7562748 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644959660 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003117253 |
|---|
| Protein GI | 256395689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC AGAGCGCGTC CGTGACCACT GACGCCGGCG CGTCGCCGCC CCCCGGCCTC
CATCCCGTAC GCCGGGGCGT CCCCGGGCGC CGGATCAGAA GTGGGCTGCG CGCCGAGGCC
GTGCCGCTGG CCCTGGTCGC GGTGCTGGTG TTCGCCGCGT CGCTCACGGC CGCCGCCGCT
CCCGCGCGGC TGACGGCGCT GGCCGACCGC GCCCTGCGGC AGAACGTCGG CGCCGCGTCC
TTCGACGACC GGTCGCTGGC CTTCGACGCC ACGGTCACCA ATACTGCCGC GTCCGGTGCC
GCGTTCTCCG ACATGCAGGA CGCGCTGGGC GGGCGTCTGA CGCAGCCGCT GACGAAGGTG
CTGACCGGGG TCTCCCACAC CTACCGCGCT TTCTACGTGC CCACAGTCGG GACCGCGATC
TCGATGCCCG GCGGCGTCCC GGACCGGGTG GCACTGGTCG ACGACAGCCG CTCGGCGCAC
CTGATCCGCT ATGTGGCGGG CGTCGCGCCC GAGAGCGCTT CCTCGCAGGC CCTCCTGTCC
GATCCCGACC ACCAGATCGC GATCGGCGTC AGCAGCAAGG CCAGCGCGGT CCTGCATCTG
CCGATCGGTG CCGTGGTCCA GTTCGGCGGC CCGGGGATCG GCGCCGACGG CACGCCGCGA
CCGCCGGAGA CCGGTGTGGT GTCAGGCCTG TTCGAAGCGG CGGAGCCGGT CGCCGGTCTG
GGTCCCGACG ACTCGGCCTT CTTCAGCCAG AACGACACCC TGCTCGCGCC TCGGATCACG
GTGACCGGCG GCGCCAACCC GCTGTCCTAC TGGGCGGGGG CGTTCCTGGT CTCCGACTCC
GGGCTCGCCG GGGTCGTGCA CGCCGGCGGC GGCGTGCAGA TCCAGGCCCG CTGGCGCCGC
ACGGCCGACA CCGCGGCCCT GACCGTCGCC GGGACCAAGC AGCTCGGCCG GGACCTGCAG
CACCTGGAGC AGTCCGGGGT GGAAGACCTC TGCGAACCGG CCGTGCTCCA GCAGACGTCC
TGCGAAGGTC TGGTCGGGCC GGTCGGCGAC CAGCACATCA CCGACGGTCT GACCGGGCTG
TTCGCCGTGT TCCACGGACG GCGGCTGGCG GCCGCGGCCT TGGAGTCCTT CGGCGTCGCC
TCGCTGTTGG CGGTCGAGCT GGCCTCGGTG TTCGCCGCCG CGCGGTTGGT GGCAGCCCGG
CGCACGGCCA CCGTCATCCT GCAGCGGGCC CGCGGAGCCT CCCGGCGCCA GGCCGCCGCT
CCGCTCGTCG CGGAATCAGT ACTCGTCATC GTTCCGGTCA CCGTGCTGGG CCGGCTCGTC
GGCGGCAGCG GGCAGCTGTG GCCCTCGCTG CTGGTCGCGG CGTTCGCGGT GGCCGCCATC
CCGGCGACGG TGCTGGTCAC GGCGGAGCTC ACGGCGGCGT CGGGCGATCG CCGGCGCCGC
GGCGGCGCCG TGGTGCTGTC GAAAGCCAAG CGGCGCACGG CCGAGGGCGT CCTCGCGGCG
CTGGCGATCG CCGGAGTCGT GTCGTTGCGC AGCCGCGGAG TGGCCGGGAC CATCGCCGGC
GGAAGCGTCG ACCCGGTGCT CGCCACGGTT CCGGTGCTGC TCGGCATGCT CGTCGCGGTG
CTGGCCGTCA AGGCGGTGCC CCCGGCGGCG ACCGGAGCGG TGCGGCTGGT CGGCCGCGGC
CGCGGTCGCT CGGCGGCGGC GTGGCTGGGC CTGGCGAGCG CCGCCGAGCG AGGGCAGACC
CGCGCGGTGG CACTGACGGT CCTGGTGCTG ACGCTGGGCG GGGCGGTGTT CGGCGGAGTG
GTGGTCAAGA CTCTGGACCG CGGCCAGGCC GCGGCGGCCG ACCGGCTCGG CGCGGACGCG
GTCGTGCACG CGCCGACCCT CACCGCCGAC GTCCTGAACC GTCTGAAGTC CCTGCCCGGA
GTGCGGATGG AACCGGTCCT GGCGCTCGAC CGGTCCACAG TGGACGACGA CGGCGGCCAG
CACGTGATCC GCTTCATCGG CGTCGGACCA GGGCTGGTGC CCAGCTTGCC GGCTGGCGCC
GACCCGGACG GAACGGTACC GGTCCTGGCC TCACCCGCGG CCGCACGGAA CTTCCCGGAC
GGTACCTTCA CCATCAGCCT GCTGTCCAAG GAGATCAACT TCCGGATCTC CAGCACGCTG
CCAACCGATC CGGGCGGCCC CGTACGAGCC GCGCTGGACG ATCCGTCGGT GGCTTACGTG
GTGCTGCCCG CCGCGGAACT GGGCCCGGAC GCCGGAGTGA CCACTCCGAC AGCGGCGGCA
CTGTACGGAC CGGTGAGCAG CGCGCGGATC CGGGCCGCAC TGGCCGACGC CGCGCCGGAC
ACAACACAGA TCGAGGTGCG CTCCGAGCAA CTGGCGGAAA TGCGCTCCGA TGGCTTGTCG
CGCTCCTTGG CGGGCGTGTT CGAGGCCTGC ACCGCCCTGT CGGCGGCGTT CGCCATCCTC
GTGGTCATGC TGGAACTGGC CGGAACGGCC CGCGAGCGGG GCCGCACGGT CTCATTCCTG
CGAACGATGG GACTACCCTC CCGGTCAGCG GCGGCGATCA CGGCAGTCCA GCTCGTACCG
ACAGCAATGG CGGCGGCCCT ATCCGGCGCC CTACTCGGCG CGGCGCTGCC CTGGCTGCTC
GGTCCAGCAC TGGACATGAC CCCCTTCACC GACAGCTACC CACCGCCGAT CCGCGTCGAC
ATGACGAGCA CGGCGCTACT AGGCCTCGCG CTACTGGCCG TGGTAGCGAT CGCCGCCGCA
GCCGAGGCGC TGCTGAGCCG ACGACGCCGG ACTTCGGAAG TGCTGCGGCT GGGCGGGGAG
TAG
|
|---|
| Protein sequence | MPRQSASVTT DAGASPPPGL HPVRRGVPGR RIRSGLRAEA VPLALVAVLV FAASLTAAAA
PARLTALADR ALRQNVGAAS FDDRSLAFDA TVTNTAASGA AFSDMQDALG GRLTQPLTKV
LTGVSHTYRA FYVPTVGTAI SMPGGVPDRV ALVDDSRSAH LIRYVAGVAP ESASSQALLS
DPDHQIAIGV SSKASAVLHL PIGAVVQFGG PGIGADGTPR PPETGVVSGL FEAAEPVAGL
GPDDSAFFSQ NDTLLAPRIT VTGGANPLSY WAGAFLVSDS GLAGVVHAGG GVQIQARWRR
TADTAALTVA GTKQLGRDLQ HLEQSGVEDL CEPAVLQQTS CEGLVGPVGD QHITDGLTGL
FAVFHGRRLA AAALESFGVA SLLAVELASV FAAARLVAAR RTATVILQRA RGASRRQAAA
PLVAESVLVI VPVTVLGRLV GGSGQLWPSL LVAAFAVAAI PATVLVTAEL TAASGDRRRR
GGAVVLSKAK RRTAEGVLAA LAIAGVVSLR SRGVAGTIAG GSVDPVLATV PVLLGMLVAV
LAVKAVPPAA TGAVRLVGRG RGRSAAAWLG LASAAERGQT RAVALTVLVL TLGGAVFGGV
VVKTLDRGQA AAADRLGADA VVHAPTLTAD VLNRLKSLPG VRMEPVLALD RSTVDDDGGQ
HVIRFIGVGP GLVPSLPAGA DPDGTVPVLA SPAAARNFPD GTFTISLLSK EINFRISSTL
PTDPGGPVRA ALDDPSVAYV VLPAAELGPD AGVTTPTAAA LYGPVSSARI RAALADAAPD
TTQIEVRSEQ LAEMRSDGLS RSLAGVFEAC TALSAAFAIL VVMLELAGTA RERGRTVSFL
RTMGLPSRSA AAITAVQLVP TAMAAALSGA LLGAALPWLL GPALDMTPFT DSYPPPIRVD
MTSTALLGLA LLAVVAIAAA AEALLSRRRR TSEVLRLGGE
|
|---|
| |