Gene Caci_6542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6542 
Symbol 
ID8337906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7539124 
End bp7539621 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID644959638 
Producthypothetical protein 
Protein accessionYP_003117231 
Protein GI256395667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.222472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.072913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCGACATCGA GCCTTCTGAA CTGCTCGGCG TATATCTGAA CGATCACCTC 
ATGGGCGCCT GCGGTGGGGT GGAGCTGGCA CGCCGCATTG CTCGCACGTT CGGGGAGCCC
GACGAGCGCA GCGTCCTGGA GGAGCTCGCT GCGGAGATCG AACAGGACCG GCAGTCGCTG
ATAGACGCCA TGACCCGGCT GGACGTGCCG AGGCACTCGG CCAAGATGGC AGCCGGGTGG
CTCGGCGAAA AGATCGGGCG CCTCAAGCCC AACGGCAGCC TGGTGCACCG CACCGCGTTG
ACTCCGGTCG TGGAATTGGA AGCGATGCAT CTGGGGGTCG AGGGCAAGGA AGCGGGCTGG
CGAGTGCTTC GCGAGCTGGC CCGTAGGGAT CCCCGCCTCG AGCCGATCGA CTTCGACCGG
CTGATCGACA GGGCTACGCA CCAGAAACAG ATCCTGGATG GACTCCGTCG GCAAGCAGCG
ATGACGGCCT TCGGCTAG
 
Protein sequence
MNTTDIEPSE LLGVYLNDHL MGACGGVELA RRIARTFGEP DERSVLEELA AEIEQDRQSL 
IDAMTRLDVP RHSAKMAAGW LGEKIGRLKP NGSLVHRTAL TPVVELEAMH LGVEGKEAGW
RVLRELARRD PRLEPIDFDR LIDRATHQKQ ILDGLRRQAA MTAFG