Gene Caci_6485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6485 
Symbol 
ID8337849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7475962 
End bp7477227 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content73% 
IMG OID644959583 
ProductBeta-ketoacyl synthase 
Protein accessionYP_003117176 
Protein GI256395612 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGAC GAGCCGTCAT CACCGGAATC GGGGTGCGCG CGCCGGGCAG TCCCGGCGTG 
AAGGAGTTCT GGGATCTCCT GTCCGGCGGG CGTACCGCCA CCCGGCGCAT CACCTTCTTC
GACCCCGCGC CCTACCGGTC CCAGGTGGCC GGGGAGTGCG ACTTCGACCC GGCCGCCGAA
GGGCTCAGCC CGCGGCAGGT ACGGCGTCTG GACCGGGCCG CGCAATTGGC CGTGGTCTGC
GCCGAGGCGG CGTTGCAGGA CAGCGGCTTG GACCGTGCGG ACCTCGTCCC CGAGCGCACC
GGCGTGGTCC TGGGCAGCGC GGTCGGCGCG GCCAGCAGTC TGGAACGCGA GTACCTGGTG
CTCTCGGACA GCGGCCGCAG CTGGGTCCCG GATCTGGGGC ACCTGACGCC GCACATGGCC
GACTACCTGA CGCCCAGCGC GATGGCCGCC GAGACGGCCT GGACGGTCGG CGCCGAGGGC
CCGGCGCTGC TGGTCTCCGA CGGCTGCACC TCGGGCCTGG ACTCGGTCGG GCACGCCGCC
GACCTGATCG CCGAGGGGAC CTGCGAGGTG GTGATCACCG GCGCGGCCGA CGCCCCGGTC
TCGCCGATCG TCGTGGCCTG CTTCGACGCG ATCCGGGCCA CCACCTCGCG CAACGGCGAG
CCGGACACCG CCAGCCGGCC GTTCGACCGC ACCCGTGACG GCTTCGTACT GGCCGAGGGC
GCGGCGGTGT TCGTGCTGGA GGAGTACGAA CACGCCCGGG CCCGCGGCGC GACCGTCTAC
GGCGAGATCG CCGGCTTCGC GACCCGCTGC AACGCCTACC ACATGACCGG TCTGCGGCCC
GACGGCCGGG AGATGGCCGA GGCGATCCGG CAGGCGCTGG CCGAGGCCCG GACCGGGGGC
GGCGAGATCG ACTACATCAA CGCGCACGGC TCGGGCACCA AGCAGAACGA CCGCCACGAG
ACCGCGGCGT TCAAGCGGAG TCTGGGCGAG CACGCCTACG CCACCCCGGT CAGCTCCATC
AAGTCGATGA TCGGGCACTC CCTGGGCGCG ATCGGCTCGC TGGAGATCGC CGCCTCGCTG
CTGGCGATGC GGCACGACCT GGTACCGCCG ACGGCGAACC TGCACGAGGC CGACCCCGAG
TGCGACCTGG ACTACGTGCC GGTCGTGGCG CGGGAGCGGC GACTGGACAC GGTGCTGTCG
GTGGGCAGCG GCTTCGGCGG GTTCCAGAGC GCGATGGTGC TCAAGAGCGT GCCCGAGGCG
GCGTGA
 
Protein sequence
MTRRAVITGI GVRAPGSPGV KEFWDLLSGG RTATRRITFF DPAPYRSQVA GECDFDPAAE 
GLSPRQVRRL DRAAQLAVVC AEAALQDSGL DRADLVPERT GVVLGSAVGA ASSLEREYLV
LSDSGRSWVP DLGHLTPHMA DYLTPSAMAA ETAWTVGAEG PALLVSDGCT SGLDSVGHAA
DLIAEGTCEV VITGAADAPV SPIVVACFDA IRATTSRNGE PDTASRPFDR TRDGFVLAEG
AAVFVLEEYE HARARGATVY GEIAGFATRC NAYHMTGLRP DGREMAEAIR QALAEARTGG
GEIDYINAHG SGTKQNDRHE TAAFKRSLGE HAYATPVSSI KSMIGHSLGA IGSLEIAASL
LAMRHDLVPP TANLHEADPE CDLDYVPVVA RERRLDTVLS VGSGFGGFQS AMVLKSVPEA
A