Gene Caci_6482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6482 
Symbol 
ID8337846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7473492 
End bp7474439 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content72% 
IMG OID644959580 
ProductNmrA family protein 
Protein accessionYP_003117173 
Protein GI256395609 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCC GGCATGCCGA CAAGACGCGG CACGAGATCC TGGTGCTCGG CGCGACCGGG 
AAACAGGGCG GATCCACCGC CCGGCAGCTG CTCAAGCGGG GGTGGCAGGT CCGCGCCTTC
GTCCGGGATC CGGCCAAGGC GCAAGCGGTG GACCTGGCCG GGCTGGGCGC GACGCTGTAC
GTCGGCGACC TCGACGACGC CGACAGCATC CACCGCGCGA TGTACGGGGT CTACGGCGTG
TTCAGCGTGC AGACGCCGCT CGGCCCGGCC GGAGTGCCCG GCGAGGAACG GCACGGCAAG
CTCGTCGCCG ACATCGCCGC GCACAACGGC GGCGTACGCC ACTACGTCCA CAGCTCGGTC
GGCGGCGCCA CGCGGCCCGA GGGTCTGCAC TGGCGCGAGG CGAAGCTCCG GGTCGAGGAA
CGCGTGCTGG AGCACGGGCT TCCGGCCACG TTCCTTCGTC CGGCGTACTT CATGGAGAAC
CTGAACACCG ACATGTATCC GCCGATCCTG GAGGACGGCG GGCTGGTCTA CCGGCGAGGG
CTGGCGGACG GCGTGAAGCT CCAGATGATC GCCGCGGCCG ACATCGGCGT GTTCGCCGCG
CAGGTCTTCG ACGAAGGGCC CGAAGACGCC GTCGGGCACC ATCTGGAGCT GGCCGGCGAC
GAGCTGACCG GCGCGGAGAT CGCCGAGGCC TTCGCCCGGC ACACCGGACT GAGCGCCCGG
TACGAGGCCA TCGCGCCGGA CGACCTGGTC AACCAGAGCC ACTGGCAGGT CGAGGCATAC
GGCTGGCTCA ACCGCATCGG ATACAGCGCG GACATCCCGG CGCTGCGCGA GCGGTTCCCG
GAGCTGTCGA CGCTGGACAG CTGGCTTGCC CGGACCGCCT GGAAGCCCGG CGCCCCGGCC
GCTGCCCCAG CCGCTGCCCC GGCTGCCGCC TCCAGCCCGC AAGCCTGA
 
Protein sequence
MTVRHADKTR HEILVLGATG KQGGSTARQL LKRGWQVRAF VRDPAKAQAV DLAGLGATLY 
VGDLDDADSI HRAMYGVYGV FSVQTPLGPA GVPGEERHGK LVADIAAHNG GVRHYVHSSV
GGATRPEGLH WREAKLRVEE RVLEHGLPAT FLRPAYFMEN LNTDMYPPIL EDGGLVYRRG
LADGVKLQMI AAADIGVFAA QVFDEGPEDA VGHHLELAGD ELTGAEIAEA FARHTGLSAR
YEAIAPDDLV NQSHWQVEAY GWLNRIGYSA DIPALRERFP ELSTLDSWLA RTAWKPGAPA
AAPAAAPAAA SSPQA