Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6413 |
Symbol | |
ID | 8337776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7400489 |
End bp | 7401256 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644959514 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003117108 |
Protein GI | 256395544 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0597317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGG GCGTCGCCCT GGTGACCGGC GCCTCGTCGG GCATCGGGGC GGTGACCGCC GCCGCGCTGG CCCGCCGCGG CTACCGCGTC GTGGTCCACG GCCGCGACGA ACGTGCCACC GCCGGCGTCG CGATGGCCGT GAACGGCGTC CCCGTCTGCG CCGACCTTGC GCACGCCGGC GAAGCCGAAC GCCTCGCCAC CCGTGCCCTG GAAGTCGGCG ACGGCCGCAT CGAGGTCCTG GTGAACAACG CGGGCTTCGG CTGGCACGGC GACTTCCGCA CGATGCCCAA AGGCACCGCC GACCGCCTCC TCGCCGTGAA CCTCGCCGCC CCGATCGCCC TGACCCGCGC ACTGCTCCCG GCGATGCGCG AGCACAACGC GGGCCGCGTG GTGTTCGTCA GCTCCATCGC CGGCCGCCTC GGCGTCGGCG GCGAAGCGGT GTACGCGGCG AGCAAAGCAG GCCTCGACTG CTTCGCGGAC AGCCTGCGCG GCGAACTGCG CGAGACCGGA ATACGAATCG GCGTGGTGGT GGCAGGCGTG ATCGCGACAC CCTTCTTCGA CCGCCGCGGC ACCCCCTACG CCCGCCGCTG GCCGAAACCG ATCCCGACGG AGGCCGCCGC CGAGGCGGTG ATGCGGTGCG TGGAGCGGGG CACGGCGGAG GTGTACGTGC CCCGCTGGTT GCGCGTGCCG GTGGTGGTGC AGGGGGTGGC GCCGGGGGTT TATCGGTGGT TGGAGGGGCG GTTCGGGGGC GAGGGCGGGA CTAGGTGA
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Protein sequence | MSRGVALVTG ASSGIGAVTA AALARRGYRV VVHGRDERAT AGVAMAVNGV PVCADLAHAG EAERLATRAL EVGDGRIEVL VNNAGFGWHG DFRTMPKGTA DRLLAVNLAA PIALTRALLP AMREHNAGRV VFVSSIAGRL GVGGEAVYAA SKAGLDCFAD SLRGELRETG IRIGVVVAGV IATPFFDRRG TPYARRWPKP IPTEAAAEAV MRCVERGTAE VYVPRWLRVP VVVQGVAPGV YRWLEGRFGG EGGTR
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