Gene Caci_6322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6322 
Symbol 
ID8337685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7271345 
End bp7271959 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID644959423 
Producthypothetical protein 
Protein accessionYP_003117017 
Protein GI256395453 
COG category[I] Lipid transport and metabolism 
COG ID[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.302465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.309729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCA TCGCCACGAA GCCCTGCTGG ACCGTGGACC GTATGGGGTT CCGGCTTCTA 
ACTTTCGTGG TGCAGGTATT CCAAGGATAT GGAGCCGAAG TGACCGACAT TAGCGTGTCC
TACCGAAAGA GATTTCTTGT CACGAGCGTC TCGTCCGACG CACACATGTG GAATCTGGTC
TTCCTGCAGC TTCTTCTCGA AGAACGGGAT GGTGATGTGA CCAACCTCGG CATCTGTGTA
CCGGACGAGG TGATCATCGA TGAATGTCTG CGCAGCCGGC CCGACGTCGT CGTGGTGAGC
ACGGTGAACG GCCACGGACA CATCGACGGA CTGCGCCTCA TCCGCAAGCT CCGGGCGGTT
CCGGAACTGG CCGACATGAA AGTCGTGATC GGCGGAAAGC TCGGCGTCAA GGGCGCCGAG
AATGCCAAAT ACAGCGCCGA ACTCGTCGCG AACGGATTCG ACGCCGCCTT CGAGTCCAGC
ACCGGACTCG CCGCCTTCGA GAGCTTTCTC GGCTCCATCC GGAGCAAGCC GCGCACCGCG
GTGCTCGCCG CCTCCGTGCC GACCGCCGCG GACCTGGTGT CCCACGAGCT CGTCGCCGCC
GGGAGCCCGG CATGA
 
Protein sequence
MGVIATKPCW TVDRMGFRLL TFVVQVFQGY GAEVTDISVS YRKRFLVTSV SSDAHMWNLV 
FLQLLLEERD GDVTNLGICV PDEVIIDECL RSRPDVVVVS TVNGHGHIDG LRLIRKLRAV
PELADMKVVI GGKLGVKGAE NAKYSAELVA NGFDAAFESS TGLAAFESFL GSIRSKPRTA
VLAASVPTAA DLVSHELVAA GSPA