Gene Caci_6302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6302 
Symbol 
ID8337665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7250892 
End bp7252097 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content68% 
IMG OID644959403 
Producthypothetical protein 
Protein accessionYP_003116997 
Protein GI256395433 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0344575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG TGCTCATCCT CTCCTGGAAA GCCATAGGCA ACGTGGCGCC CGCGGTCAAG 
GAACTGCGGG CCCGAGATCT GCGGCCGGTC CTGGTCTCCA ATCTCCCGGA CGACCCCAAC
GCCATCCTGT GCGACGAGCA CGTCGTCTTC GACTGGGACC GCGAGCAGCT CCCGGCTCTC
CTGGCCCGCC TCGACGAGCG CGCCCTGGAC CTGGTCGGCG CCGTCAACAT GGTCGAGAAG
CTGATCGGCT GGCACCACGC GGTCACCGCG CACTACGGCC TGCCCGGCGG CGACGCCGGC
CGCCTCGCGA TCGCGAGCAA GACCGCGGTC CGGGACCGGA TGCGGGCCCT GGGCCTGTCG
GACATCAAGT ACGCCGGCGA GGCGGACGCG CCCGAGACCG TGGACTTCTT CCCCGCGATC
GTCAAACCCG CGCGCGTGTC AGGAGCCTCA TACCTGGTCC GCCGCGTCGA CGACCTCGCC
GAGTTGCTCG CCTATCGGCA GCAGCTGGCG GACTCCGGAG CCGGCGACAT CGAGATGATC
GTCGAGGAGT ACCTGTCCGG AACCGAGTTC TCCGTGGACG GCCCGGTAGT CCGCGGCCGC
TTCCACCCGG TCCTCGCGGT GGAGAAGCCC GACCACAACG AGGTCACGCA CCACGACGCC
GGCCTGGAGT TCCACCCGCC GCAGAGCGAC CACGTCCGCG AGGGCGTGCG CGTCTTGTGC
GAGACCGTCA GCACCCTGTG TACCGACCTC GGCCTGGACC AGCTCTGGCT GCACTTCGAA
GGACGGAGCT CCGCCGACGG CCGCACCGAG CTCATCGAGA TCAACCCCCG GCCCGGCGGC
GGCCAGATCC CCAAAGCGGT CCAGGAGATC AGCGGCATCG ACGCGATCGA GGCGGTCGTC
TCCATGTCCC TGGGCGTCTA CACACCGGAG AACCTGGGAC CGCTGCGCGA GCAGCCGATC
ATCGGCTGGA TGGACGTGGA GGCCTACGAG GTCGGCACGG TCGACGTCGC CAGCAGCGAA
GCCGACTTGC TGGCGCTGCC CGGCGTCATC AACATCAAGC TTCTCAACGG CTTCCAGATC
AAGAGCCTGG ACATCGAGAA CTTCTTCTTC TCCTTCGCGG TGGTCGCCGA TTCGGTCGAC
CAGCTGCGCG CTCACGCCGC GACCGTCTTG GAGACCCTCG ACTATCGCGT CGTGCCGGCG
GAGTGA
 
Protein sequence
MKSVLILSWK AIGNVAPAVK ELRARDLRPV LVSNLPDDPN AILCDEHVVF DWDREQLPAL 
LARLDERALD LVGAVNMVEK LIGWHHAVTA HYGLPGGDAG RLAIASKTAV RDRMRALGLS
DIKYAGEADA PETVDFFPAI VKPARVSGAS YLVRRVDDLA ELLAYRQQLA DSGAGDIEMI
VEEYLSGTEF SVDGPVVRGR FHPVLAVEKP DHNEVTHHDA GLEFHPPQSD HVREGVRVLC
ETVSTLCTDL GLDQLWLHFE GRSSADGRTE LIEINPRPGG GQIPKAVQEI SGIDAIEAVV
SMSLGVYTPE NLGPLREQPI IGWMDVEAYE VGTVDVASSE ADLLALPGVI NIKLLNGFQI
KSLDIENFFF SFAVVADSVD QLRAHAATVL ETLDYRVVPA E