Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6302 |
Symbol | |
ID | 8337665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7250892 |
End bp | 7252097 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644959403 |
Product | hypothetical protein |
Protein accession | YP_003116997 |
Protein GI | 256395433 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0344575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCG TGCTCATCCT CTCCTGGAAA GCCATAGGCA ACGTGGCGCC CGCGGTCAAG GAACTGCGGG CCCGAGATCT GCGGCCGGTC CTGGTCTCCA ATCTCCCGGA CGACCCCAAC GCCATCCTGT GCGACGAGCA CGTCGTCTTC GACTGGGACC GCGAGCAGCT CCCGGCTCTC CTGGCCCGCC TCGACGAGCG CGCCCTGGAC CTGGTCGGCG CCGTCAACAT GGTCGAGAAG CTGATCGGCT GGCACCACGC GGTCACCGCG CACTACGGCC TGCCCGGCGG CGACGCCGGC CGCCTCGCGA TCGCGAGCAA GACCGCGGTC CGGGACCGGA TGCGGGCCCT GGGCCTGTCG GACATCAAGT ACGCCGGCGA GGCGGACGCG CCCGAGACCG TGGACTTCTT CCCCGCGATC GTCAAACCCG CGCGCGTGTC AGGAGCCTCA TACCTGGTCC GCCGCGTCGA CGACCTCGCC GAGTTGCTCG CCTATCGGCA GCAGCTGGCG GACTCCGGAG CCGGCGACAT CGAGATGATC GTCGAGGAGT ACCTGTCCGG AACCGAGTTC TCCGTGGACG GCCCGGTAGT CCGCGGCCGC TTCCACCCGG TCCTCGCGGT GGAGAAGCCC GACCACAACG AGGTCACGCA CCACGACGCC GGCCTGGAGT TCCACCCGCC GCAGAGCGAC CACGTCCGCG AGGGCGTGCG CGTCTTGTGC GAGACCGTCA GCACCCTGTG TACCGACCTC GGCCTGGACC AGCTCTGGCT GCACTTCGAA GGACGGAGCT CCGCCGACGG CCGCACCGAG CTCATCGAGA TCAACCCCCG GCCCGGCGGC GGCCAGATCC CCAAAGCGGT CCAGGAGATC AGCGGCATCG ACGCGATCGA GGCGGTCGTC TCCATGTCCC TGGGCGTCTA CACACCGGAG AACCTGGGAC CGCTGCGCGA GCAGCCGATC ATCGGCTGGA TGGACGTGGA GGCCTACGAG GTCGGCACGG TCGACGTCGC CAGCAGCGAA GCCGACTTGC TGGCGCTGCC CGGCGTCATC AACATCAAGC TTCTCAACGG CTTCCAGATC AAGAGCCTGG ACATCGAGAA CTTCTTCTTC TCCTTCGCGG TGGTCGCCGA TTCGGTCGAC CAGCTGCGCG CTCACGCCGC GACCGTCTTG GAGACCCTCG ACTATCGCGT CGTGCCGGCG GAGTGA
|
Protein sequence | MKSVLILSWK AIGNVAPAVK ELRARDLRPV LVSNLPDDPN AILCDEHVVF DWDREQLPAL LARLDERALD LVGAVNMVEK LIGWHHAVTA HYGLPGGDAG RLAIASKTAV RDRMRALGLS DIKYAGEADA PETVDFFPAI VKPARVSGAS YLVRRVDDLA ELLAYRQQLA DSGAGDIEMI VEEYLSGTEF SVDGPVVRGR FHPVLAVEKP DHNEVTHHDA GLEFHPPQSD HVREGVRVLC ETVSTLCTDL GLDQLWLHFE GRSSADGRTE LIEINPRPGG GQIPKAVQEI SGIDAIEAVV SMSLGVYTPE NLGPLREQPI IGWMDVEAYE VGTVDVASSE ADLLALPGVI NIKLLNGFQI KSLDIENFFF SFAVVADSVD QLRAHAATVL ETLDYRVVPA E
|
| |