| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6298 |
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| Symbol | |
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| ID | 8337661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7245203 |
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| End bp | 7246018 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644959399 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003116993 |
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| Protein GI | 256395429 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.1246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC TCAGATCCGG CGCGGCCGAC CCGGACTTCG GCGACGGCTT CGGCAACGAC
TTCGCAGGTC TGGCGGCGAT CGTCACCGGC GGTTCGGGGG CGATCGGGCT GGCCGCGGCC
GAACTGCTGA AGAGCCGGGG CGCCCGCGTC GCCGTGCTGG CGCGCCGGCC CGGCGAGCTG
CCGGACGGGA TCGTCGGGAT CGAGGCGGAC GTCACCGACG ACGCCTCGGT CAAGACCGCG
GTGGACGCCG CGGCCGAGCG GTTCGGGCGG CTGGACGTCG TGGTGAGCAA CGTCGGCATC
TCCGCTTACG GAGACGTCGC CACGAACAGC GACCAGGAAT GGTCGCAGGT CTTGGACGTC
AACGTGATCG GGATGGTCCG GATCGTCCGG CACGCGCTGC CGCATCTGCG GCGCTCGCCG
GCCGCGGCGA TCGTCACCAC CGGCTCGATC GTCGGATGGG CCGGCATGGC GCAGCGGGCG
CTGTATTCGA CCACGAAGGG CGCGGTGCAC GCGCTGACGC TGGCGATGGC GGCGGACTAC
GTGCGCGAGG GCATCCGGGT CAACTGCGTC TCCCCCGGCG CGGTGGACAC ACCCTGGGTG
AACCGGCAGC TGAGCGAGGC CGAGGACCCG GAGGCCGCGC GCGCCGAGTA CCTCGCCTTC
CAGCCGGCCG GGCGCCTGGT GACCACCGCC GAGGTCGCCG GGGCGATCGC CTACCTGGCC
AGTCCGCTGT CCGGCGGCAC GACCGGCACG GTGCTGGCCG TCGACGGCGG CATGTACAAC
CTGCGGCTGC GGCCGCCGAC CAAGGAGCGA GTGTGA
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| Protein sequence | MSELRSGAAD PDFGDGFGND FAGLAAIVTG GSGAIGLAAA ELLKSRGARV AVLARRPGEL
PDGIVGIEAD VTDDASVKTA VDAAAERFGR LDVVVSNVGI SAYGDVATNS DQEWSQVLDV
NVIGMVRIVR HALPHLRRSP AAAIVTTGSI VGWAGMAQRA LYSTTKGAVH ALTLAMAADY
VREGIRVNCV SPGAVDTPWV NRQLSEAEDP EAARAEYLAF QPAGRLVTTA EVAGAIAYLA
SPLSGGTTGT VLAVDGGMYN LRLRPPTKER V
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