| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6164 |
|---|
| Symbol | |
|---|
| ID | 8337527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7092564 |
|---|
| End bp | 7093784 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644959265 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003116859 |
|---|
| Protein GI | 256395295 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4152] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0995946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC TCGATGGTCT GCGCAAACTC TACGGCGATC GCATCGCGCT GGACGGCGTG
ACGTTCTCGG TGCGTCCGGG CGAGTTGTAC GGCTTCGTCG GCACCAACGG CGCCGGCAAG
ACCACCACGA TGCGGATCAC CCTCGGCGTC CTGGAACCCG ACGCCGGCAC CGTCCGCTTC
CAGGGCAAGC CGGTCGACAC CCCCACCCGC CGCCGCTTCG GCTACATGCC CGAGGAACGC
GGCCTGTACC CCAAGATGCG CGTCGGCGAC CAACTCCGCT ACCTGGCCGA ACTCCACGGC
ATGACCCGCC GCGACGCCGC CACCGCCACG AAGTACTGGA TGGAACGCCT CTCCGTCGCC
GAACGCGCCG AAGACCGCGT CGAGGCCCTC TCCCTGGGCA ACCAGCAGCG CGTGCAACTA
GCCGCGGCCC TCGTCCACCA CCCGGCGGTC CTGGTACTCG ACGAACCCTT CTCCGGCCTC
GACCCGGTCG GCGTGGACAA CCTCGCCGAG GTCCTGCGCG AAAGGGCAGC CGAGGGCGTG
CCCGTGGTGT TCTCCAGCCA CCAGCTGGAA CTGGTCGAGC GCCTGTGCGA CTCCATCGGC
ATCATCTACC GCGGCCGAAT GGTCGCCACC GGAACCGTCG ACGAGCTGCG CGCCTCCCGG
GCCGAGCGAG GCCTGCGAGT GGGCACGGAC GCGGCCGCGG GATGGGCCGA CGGCCTGGCC
GGCGTGGAGT CCGCGGAGTA CGGGGCGAGG ACGACGCTGA TCCTCACCGC GGACGCCGAC
GACCAGGCGA TTCTGGACGC CGCGCGGGCA CTGGGACCGG TGCGGGAGTT CACGCCGCTG
CGGCCGAGTC TGGCGGACTT GTTCCGGGAG GCGGTCGCCG ATCACGACAG TGATGGTGAT
GGTGATGGCA ATAGTGATGG CGATGGCGAG AGCGGCGGCA GGAGTGGCAA CCAGGCGCGC
ACCGGCACCA AAGCCAGCGC GACCGGCGAC CAGGCAAGCG CTGGCTCCCA CAGCGTCGCC
GCCAGCCTGA CCAGCGACGA GGCAAGCGCC GGCTCCCGCA GCGACACTGC TGCCAGCCTG
ACTAGCGGCG AGGCCAGCGG CCATGCTGGC GCCGACGAGA GCAGCGGCAC CGCCAACCTG
ATCGGCGGCC AGCGCGGTGA TCAGGCAGGC GCTGATCCCG ACAGTGCCGC CCCTACCGAT
CAGCAGGGAG CCTCCGCGTG A
|
|---|
| Protein sequence | MLELDGLRKL YGDRIALDGV TFSVRPGELY GFVGTNGAGK TTTMRITLGV LEPDAGTVRF
QGKPVDTPTR RRFGYMPEER GLYPKMRVGD QLRYLAELHG MTRRDAATAT KYWMERLSVA
ERAEDRVEAL SLGNQQRVQL AAALVHHPAV LVLDEPFSGL DPVGVDNLAE VLRERAAEGV
PVVFSSHQLE LVERLCDSIG IIYRGRMVAT GTVDELRASR AERGLRVGTD AAAGWADGLA
GVESAEYGAR TTLILTADAD DQAILDAARA LGPVREFTPL RPSLADLFRE AVADHDSDGD
GDGNSDGDGE SGGRSGNQAR TGTKASATGD QASAGSHSVA ASLTSDEASA GSRSDTAASL
TSGEASGHAG ADESSGTANL IGGQRGDQAG ADPDSAAPTD QQGASA
|
|---|
| |