Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6144 |
Symbol | |
ID | 8337507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7070957 |
End bp | 7071688 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644959245 |
Product | ApbE family lipoprotein |
Protein accession | YP_003116839 |
Protein GI | 256395275 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.592047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0391873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGTCC GCCACGTCGA GCCGGCGATG GGCACGGTCT TCTCGATCGT CGCCGACGTC GGCGACGGGA TCCCGGCGGC GGTGGCCCGG CTGCACGCGA TCGACGCCAA GTTCTCCACC TATCGCGACG ACAGCCCGGT CAGCCGCATG GCCCGCGGTG AGGCCGTGGA ACGCGACCCG GAGATCGCCG AGGTCCTCCG GCGCTGCGCC GAGGTCGAGG CCGACACCGC CGGGGCGTTC ACCGCCTACC CGGCCGGCCG CCTGGACCCC AGCGGCTGGG TGAAGGGCTG GGCGATCGAG GAGGCGGACC GCCTCCTGAC CGCCGCCGGC TCCCGCAACC ACCTCATCGT CGGCGGCGGC GACGTCCAAG CCCGAGGCGA GGCCGAACTC GGACGCCCCT GGACCATCGG CGTCACCGAC CCCCTGCACC CCGACCGCTA CGCCGCCCTG GTCACCGGCC GCGACTTCGC CGTCGCCACC TCCGGCACCG CCGAACGCGG CGCCCACATC ATCGACCCCG CCACCGCCGA ACCCGCGACC GGCTTCGCCT CGGTGACGCT GATCGGCGCC CGCATCGCGC ACACCGACGC CTACGCGACC GCGGTCTTCG CCATGGGACC GGAACGAGGC ATGGAATGGG CCGAGGAGCG CGCCGGGTTC GAGGCGTACG CGGTACTGCC GGACGGGACG ACAGTGGAGA CGGCAGGGTT CGCGCGGTAT CTGGCCGGGT GA
|
Protein sequence | MTVRHVEPAM GTVFSIVADV GDGIPAAVAR LHAIDAKFST YRDDSPVSRM ARGEAVERDP EIAEVLRRCA EVEADTAGAF TAYPAGRLDP SGWVKGWAIE EADRLLTAAG SRNHLIVGGG DVQARGEAEL GRPWTIGVTD PLHPDRYAAL VTGRDFAVAT SGTAERGAHI IDPATAEPAT GFASVTLIGA RIAHTDAYAT AVFAMGPERG MEWAEERAGF EAYAVLPDGT TVETAGFARY LAG
|
| |