Gene Caci_6105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6105 
Symbol 
ID8337468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7024503 
End bp7025303 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID644959207 
ProductPolypeptide-transport-associated domain protein FtsQ-type 
Protein accessionYP_003116801 
Protein GI256395237 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0142366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0529885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA CCGGAGCCGG CCACCCGCGG GTCAGCAGGG TATTGGTCGA GCGCTACCTC 
GACCGGCTGC GGCGGCGGCG CCGCTGGCGG CGGCTGTCGG TGACGATCAC GGTGTTCCTC
GCCCTGCTCG CGCTGACCGG CTACTCGATC CTGTGGCACA CCAAGGTCTT CGACGTCCGC
ACCACCACCG TCTCCGGCGT CAAGGTGCTG AGCCGGCAGC AGGTGCTGGC CGCCGCCGCG
ATCCCGGCGC ACGCCCCGGT CGCGGCGGTG GACACCGCGG CGGCCAAGGC CCGGCTGATG
GCGCTCCCGC GGGTGAAGGA CGCCTGGGTG GAGCGTTCGC TGCCGCACAC CGTCTCCATC
GGCATAGTGG AGCGGACCCC GGCCGCCGCG CTGCCGCAGC CCGACGGCTC CTTCCAGATC
GTCGACGCCG ACGGGGTGGC CTTCGACACA GCGGCCTCCG CCTCGGCGAT CCCGGCGCAC
GTCCCGGTCA TCCACCTGGA GCAGTTCGCC GATCCGGGAC CTGAGGCGAA GGCCGCCCGC
GCGGCCACCG TCGCCGGCGC GCTGGCCGCT CTTCGAGCCC TGCCGCCCCC GGTGCTCTCG
CGGGTGCTCA CCGTGTCGGC GACCGGGCCC TACGCCATCA CCGTGACGCT GACTCCGTCC
ACGAAGAAAC AGCACTCCGT GACGGTCGCT TGGGGCGGAC CGGATCAGCC GGTTCTCAAG
GCACGGATAC TGGCGGCACT GATCGGAAAT GACGCCGCGC ACTATGATCT GAGTGCTCCG
GCGGCTCCGG CGTATTCGTA A
 
Protein sequence
MNATGAGHPR VSRVLVERYL DRLRRRRRWR RLSVTITVFL ALLALTGYSI LWHTKVFDVR 
TTTVSGVKVL SRQQVLAAAA IPAHAPVAAV DTAAAKARLM ALPRVKDAWV ERSLPHTVSI
GIVERTPAAA LPQPDGSFQI VDADGVAFDT AASASAIPAH VPVIHLEQFA DPGPEAKAAR
AATVAGALAA LRALPPPVLS RVLTVSATGP YAITVTLTPS TKKQHSVTVA WGGPDQPVLK
ARILAALIGN DAAHYDLSAP AAPAYS