Gene Caci_6082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6082 
Symbol 
ID8337445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7004750 
End bp7005505 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID644959185 
Producthypothetical protein 
Protein accessionYP_003116779 
Protein GI256395215 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0830001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT CGGTCGTCAG CGGCCTCGCC TTCGGACCCG GCGGCCAGCG CTTGGACGTG 
TACTCCCCCA CCGACTCCCT TGAGGCGCGG CAGCCAGAGT GCCCCATCGT GCTGCTGTGG
CACGGAAGGG GACCGGATGA ACGCGACGTC CTGGCTCCCC TGGCGATGGC GACGGCCGCT
TCGGGCGTCG TGTGCGTCGT GCCGGACTGG CGACCCGATG CGCCGGATCT GGGGCGTACC
CACCTGCGCG AGTCTGCTTT GTTCGTGCAG CAGCACGGAG GCGATTTCGG CGGGGACGTC
AGCCGGACAA CCCTGGCCGG CTGGTCGCTG GGAGGCAAGA CCGCGGTGGG CGCCGCGCTG
GACGCAGCGG CGCTGGACGG CTGGCGGCCG CAGGCGGTCG TCGCGATCGC GGGCGGGTAT
TCGAGCGCAG ATCCTCTCAC CCGGCAGGTG GCGATGGACC GGCTCGCCGG AGCCGGGGCA
TTGGCGGAGC CCATTCCGGT CCACCTGGTC CACGGCACCG CTGATGTACT CGTCGACATC
GAGCGATCAC GCCTGCTCCA TGCGGCTCTG CGCGATCGCG ACTGGCCGTG CACCCTCACC
GAGCTGGACG GCGCAGACCA TGCCGGCGTG GTCATGACCG TGTACGACCC CGAAGCGCGC
CGCTGTCAGG CGACCGACGC CGAACACGTG CTGCGGGCCG GGCATCAGAC CGCGCAGGTC
ATCGCGCGGG CCGCGACAAG CCCATCAGGT CCCTGA
 
Protein sequence
MNVSVVSGLA FGPGGQRLDV YSPTDSLEAR QPECPIVLLW HGRGPDERDV LAPLAMATAA 
SGVVCVVPDW RPDAPDLGRT HLRESALFVQ QHGGDFGGDV SRTTLAGWSL GGKTAVGAAL
DAAALDGWRP QAVVAIAGGY SSADPLTRQV AMDRLAGAGA LAEPIPVHLV HGTADVLVDI
ERSRLLHAAL RDRDWPCTLT ELDGADHAGV VMTVYDPEAR RCQATDAEHV LRAGHQTAQV
IARAATSPSG P