Gene Caci_6077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6077 
Symbol 
ID8337440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6998664 
End bp6999998 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content72% 
IMG OID644959180 
Producthypothetical protein 
Protein accessionYP_003116774 
Protein GI256395210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.596344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA TAGCGTGGCT GCGGCGACCG GACGGGACCA CCTCCCGCCT GGGCGGCGGA 
CAGGTGCGCG TCGGTGCGGC GCTGCTCGCG GTCGTGATCG CGGTCGTCGT CGCGCGCTGC
GCCATGTCGT CCTCGGCGCA GGCCGCGCCG CCGGAGCCGA AGGTGCGGGC CGCTGTCGCC
GCCACCTTGG CCGCCCGCGC CGCCGCCGTC GCCGACCACG ACAAGGACGC CTATCTCGCC
ACCGACGCCG CCGGGGCGTT CCAGACCGCC GACGCGCAGG TCTTCGACAA CCTGGCGGCG
CTGCCGCTGG CCTCGTGGGG CATGGCGGTC GCCGCCGATC AGAGCGGGGT GCAGAAGGCC
GGCGTGGCGC ACCTGTACCG GGTGACCGAG TCCTACGAGC TGTCCGGCGT CGACTACAAG
CCGGTGACCG GCACGCGGTA TCTGACGTTC GTCGAGCGCG GCGGGAGTTG GCTGCTGTCT
TCCGGCAGCG ACGGCAGCGC CGCCGGTCTG ACTCCCGACA CTCAAATCTG GGATCAGGGT
CCGGTATCGG TGGTGCACGG CTCGCGCTCG CTGGTCATCG GCCTCGGCGG CGAGCAGCGG
CTCAAGCCCT TCGCGGACCT GGCCGACCAC GCCGCGGCGA AGGCGGCGAC GGTGTGGGGC
GCGGCCGGGT GGAAGGGCGA GGTCGTCGTG GTCGTGCCGC TGACCCAGGC GCAGGTCGAG
ACGCTGCTGG ACAGCGCGCC GGGGAGTCTG GCCGGAGTGG TCGCGATCAC CGCCGGGGAG
GGCGGTCAGG CGCTGACCGC GGCGCCGGCC AGCCGGGTGC TGGTCAATCC GGAGGCCTTC
GACGGGGAGG CGCCGGACGC CTGGCAGTTC TTCTTCGATC ACGAACTCAC CCACGTCGCC
ACCCGCGCCT GGACCACCTC GGCGGTGCCG CTGTGGCTCT CCGAAGGCGC CGCGGACTAC
ACCGGCTACC TGGGTTCTTC GATCGTCACC GACCGGCGGT TCCTGGAACT GGCGGACGCC
GTGTCGAAGG ACCATTGGCA GCCGCAGAGC CTGCCGACCA CGGATGATTT CGCCGGGTCC
GGGGACTCGG TGTCGCGGAC GTACCAGATC AGCAATCTGG CGTGCGCGTT GATCGCCCAG
AGGTACGGAC AGGCGAAATT AGTCGCCTTC TACAAGGCGG TCGGCACCGC TCCGGCCGGG
ACTGCCGACC CCGTCGACCA CGCGTTCCGG ACCGTCCTGG GGACCACGAC CGCCGACTTC
ACGGTCAAGT GGCGCGCCTT CGTCCTGAGC CAGGCGCACA CCGTCGCCGC GGGACTCGCC
AAGAAGCCCT CCTGA
 
Protein sequence
MAGIAWLRRP DGTTSRLGGG QVRVGAALLA VVIAVVVARC AMSSSAQAAP PEPKVRAAVA 
ATLAARAAAV ADHDKDAYLA TDAAGAFQTA DAQVFDNLAA LPLASWGMAV AADQSGVQKA
GVAHLYRVTE SYELSGVDYK PVTGTRYLTF VERGGSWLLS SGSDGSAAGL TPDTQIWDQG
PVSVVHGSRS LVIGLGGEQR LKPFADLADH AAAKAATVWG AAGWKGEVVV VVPLTQAQVE
TLLDSAPGSL AGVVAITAGE GGQALTAAPA SRVLVNPEAF DGEAPDAWQF FFDHELTHVA
TRAWTTSAVP LWLSEGAADY TGYLGSSIVT DRRFLELADA VSKDHWQPQS LPTTDDFAGS
GDSVSRTYQI SNLACALIAQ RYGQAKLVAF YKAVGTAPAG TADPVDHAFR TVLGTTTADF
TVKWRAFVLS QAHTVAAGLA KKPS