| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6034 |
|---|
| Symbol | |
|---|
| ID | 8337397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6956271 |
|---|
| End bp | 6957464 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644959138 |
|---|
| Product | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit |
|---|
| Protein accession | YP_003116732 |
|---|
| Protein GI | 256395168 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2242] Precorrin-6B methylase 2 |
|---|
| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.775736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGA TTGCCGTCAC CGTCACCGTC ATCGGCTTCG ACGGCGCCCC ACTTTCCGAT
GCGGCGCGCT CCGCACTGGC TTCGGCGACG TTGGTCGTCG GCGGGGAGCG TCACCTGGAT
GCGATCGAGC TTCCGTCAGG TGCGGCGCGC TATGTTCTCG GCAGCGTCGA CGGCATGTTC
GATGCGATGG CGTCGCACGC GAACGTGTGC GTGATCGCCA GCGGAGATCC GGGTTTCTTC
GGCATCGTCC GTCAGCTACG AGAACGCGGA CTCGATATCA AGGTTCTGCC AGCGCCTTCC
TCCGTCGCCA CCGCTTTCGC CGCGGTCGGC TTGTCATGGG ACGACGCGAT CGTGGTCAGC
GCGCATGGAC GTGAGCTGCG TCCGGTAGCG AACGTCTGCC GCGCTTTTCC CAAGGTCGCC
GTGCTGACCG GCCCTGGCGC CGGCGCGAGG GAATTGGGCG CCGAACTCCC GGACCGCACC
TTCGTGGTCG CGCAACGCCT CGGTCACCTG GACCAGAAGA TCGAAACGCT CAGTTCCCAC
GCCGCAGCGC ACTCCACGTT CGCCGATCCG CACGTCTTGC TGTGTCTGGA CGAGTCGCGG
CTGACCTCCG AACGTGGCTG GATCGCGGGC TTCGGCGGCG TGCCGGGCAC GTGGGCGTTG
GGGGAGTCGG AGTTCGCGCA CCGTGCCTCG ATGATCACCA AGTCGGAGGT GCGGGCTCTG
GCTCTCGCCA AGCTGGGTCC GCGTCCTGGC CGCCTGGTGT GGGACATCGG CGCGGGGTCG
GGCTCGGTGG GCGTGGAGTG CGCACGGTTC GGCGCGGCGG TGGTCGCGGT CGAGCGTGAC
GCAGAGTCCT GCGATCGCAT CCGTGCCAAC GCTGCCGCAC ATGGTGTCGC CGTCGAAGTA
ATGACAGCCG ACGCCGCCAT TGCCCTCGAT CGCCTTCCGG AACCGGACGC GGTGTTCGTC
GGCGGCGGCG GCGTGGACGT GATCGCTGCC TGTGCCGCCA CCCCGGCCGC GATGGTGGTC
GTCGCGCTGG CCGCCATCGA GCGCGTTCCG GATGCCATCA GCCTACTGAC GAAGTTCGGC
CGCGATGTGG ACGGCGTGCT GCTCCAGTCC TCGCGCCTGT CCGCGCTCCC GGGCGACGCG
CACCGCTTCG CCGCCGCCAA TCCCGTGTTC CTGCTGTGGG GAGAACGACC TTGA
|
|---|
| Protein sequence | MPEIAVTVTV IGFDGAPLSD AARSALASAT LVVGGERHLD AIELPSGAAR YVLGSVDGMF
DAMASHANVC VIASGDPGFF GIVRQLRERG LDIKVLPAPS SVATAFAAVG LSWDDAIVVS
AHGRELRPVA NVCRAFPKVA VLTGPGAGAR ELGAELPDRT FVVAQRLGHL DQKIETLSSH
AAAHSTFADP HVLLCLDESR LTSERGWIAG FGGVPGTWAL GESEFAHRAS MITKSEVRAL
ALAKLGPRPG RLVWDIGAGS GSVGVECARF GAAVVAVERD AESCDRIRAN AAAHGVAVEV
MTADAAIALD RLPEPDAVFV GGGGVDVIAA CAATPAAMVV VALAAIERVP DAISLLTKFG
RDVDGVLLQS SRLSALPGDA HRFAAANPVF LLWGERP
|
|---|
| |