| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5954 |
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| Symbol | |
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| ID | 8337316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6873635 |
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| End bp | 6874321 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959058 |
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| Product | Transglycosylase domain protein |
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| Protein accession | YP_003116653 |
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| Protein GI | 256395089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.139784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCC TGTCCAGCCG CAAGAAGACC GGAATCGTCG TGGCCTCCGT GGCCGGCGCC
GCCGTCGTCC TGCCCGCCCT GCTGGCCTCC ACCGCCAGCG CGGCCAGCGT CTCCACCTGG
GACCAGGTCG CCGCCTGCGA AAGCGGCGGC AACTGGGCCA TCAACACCGG CAACGGCTAC
TACGGCGGCC TCCAGTTCTC CACCAGCTCC TGGCTCGGCG CCGGCGGCGG CCAGTACGCC
CCCCGAGCCG ACCTGGCCAC CAAGGACCAG CAGATAGCCA TCGCCGAGCA CCTCCTGGCC
TCCCAGGGCC CCGGCGCCTG GCCCGTCTGC GGCCCCCGCG CCGGCCTCAC CGCCGGCAGC
GCCGCACCCG CCGTGAACCC CGGCACCGCG AGCACCTCCA CCACGCAGAC GCAGACCCAG
ACGCAGCAGG CGCCCAAGCC GCAGACCCAG CCGGCGCCCA AGCAGCAGAC CCAGTCCTGG
ACCGCGCCGA AGCAGAACAC CCAGCCGGCT CCCGCCCCGC AGACCCAGCC GACCGGCGCG
ACCTACGTCA TCAAGACCGG CGACACCCTG TCCCAGATCG CCGTCACCCA CCACGTCGCC
GGCGGCTGGC AGACCCTGTT CCAGCTGAAC AAGGGCCAGA TCAGCAACCC GAACCTGATC
TTCCCGGGCC AGGTCGTCAA GCTCTGA
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| Protein sequence | MFTLSSRKKT GIVVASVAGA AVVLPALLAS TASAASVSTW DQVAACESGG NWAINTGNGY
YGGLQFSTSS WLGAGGGQYA PRADLATKDQ QIAIAEHLLA SQGPGAWPVC GPRAGLTAGS
AAPAVNPGTA STSTTQTQTQ TQQAPKPQTQ PAPKQQTQSW TAPKQNTQPA PAPQTQPTGA
TYVIKTGDTL SQIAVTHHVA GGWQTLFQLN KGQISNPNLI FPGQVVKL
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