| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5898 |
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| Symbol | |
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| ID | 8337260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6805173 |
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| End bp | 6806177 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644959002 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003116597 |
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| Protein GI | 256395033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.881512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.675112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCATG ATCTCCTCGC CGCACCCCCG ACCCGGTGGC GCACCGACTG GTCCACCGAC
GGCGAGTCGC CCAGCGGGCA CTGGGACTGG GTCGTGGCCA TGGCGACGGC GGAGGTGGAC
GGGCGGCTCG TCGCGCTCAG CGGGGGTTCG GACCAGGCGG TGCGCGCCTG GGACGCCGCG
ACCGGCGAGG CGCTCGGCGA GGCCGTCACC GGACACTGGG GCACGGCGCT GGCGACCATG
ACCCTCCAGG GCCGGCCGCT CGTGCTCAGC AGCGGCACCG ACATGACGGT CCGGGTGTGG
GACCTGGCGG CGGGCCGGCC GTCCGGCGAG CCGCTGCGCG GTTTCGAGGA CAAGGTCGAG
GCGGTCGCCA CGACCGTCGT GGACGGCCGT CCCGTCGCCG TCACCGCGAC CGGCAGCGCC
CTCGGACTCG CCGATCCGGC CGTGCGCATC TGGGACCTGA CGACGCGCCG CCCGATCGGC
GCGCCGCTGA CCGGGCACGC CGACGCGGTC TGCGCGGTGA CCACGACCAC CCTGCACGGA
CGCGCCGTCG CGGTGACGGC TGGCAACGAC GCCACCGTCC GCATCTGGGA CCTGGCCACA
CAGAGCCAGC TCGGCGCCGC CCTGACCGGC CACACCGACG CCATCTGGGC CATCGCCACG
ACCGTCCTGG ACGGCCGCGC CGTCGCGGTG ACCAGCAGCG ACGACTCGAC GCTGCGCGTG
TGGGACCTCG CCGCGGGCGC ACCGCTGGGC ACCCCGCTGA CCGGCCACAC CGCCGGCGTG
GAGACCGTGA CCACGACCGT GCTGGACGGC AGGCCGGTGG CGGTCTCAGG AAGCTGGGAC
CAGACCGTTC GCATATGGGA CCTGGCCACC GGAGCGCAGG TCGGCCCGGA ACTGGCGTTC
CCGGCGCAGG TGCAGGCGCT GACCGCGACG CCGGACGGAC GGCTGTTAGT GGGCTACGAC
CGGGGCGTGG CGGCGCTGTC GGCGATGGAC GCCGTGAAGG ACTGA
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| Protein sequence | MLHDLLAAPP TRWRTDWSTD GESPSGHWDW VVAMATAEVD GRLVALSGGS DQAVRAWDAA
TGEALGEAVT GHWGTALATM TLQGRPLVLS SGTDMTVRVW DLAAGRPSGE PLRGFEDKVE
AVATTVVDGR PVAVTATGSA LGLADPAVRI WDLTTRRPIG APLTGHADAV CAVTTTTLHG
RAVAVTAGND ATVRIWDLAT QSQLGAALTG HTDAIWAIAT TVLDGRAVAV TSSDDSTLRV
WDLAAGAPLG TPLTGHTAGV ETVTTTVLDG RPVAVSGSWD QTVRIWDLAT GAQVGPELAF
PAQVQALTAT PDGRLLVGYD RGVAALSAMD AVKD
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