| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5858 |
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| Symbol | |
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| ID | 8337219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6765871 |
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| End bp | 6767580 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958962 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003116557 |
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| Protein GI | 256394993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.364305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGTAC GGACCTCGAA GTCCTTGGCG GCGCGCGGAG TGCACGTGCG CACCACCCCC
GACGGCGAGC CGGCTTACAC CGAGGCGCAG GTGGACCGCG AGGACGGCGA CGAGGTCTGG
TGGCGCGCGA GCGTGCCGGT GGTCAATGGG GAGCTCGGTT ACCGGTTTCT GGTCCAGACG
CCGGGACGGC GGCTGTGGCT GAACGGCGCG GGATTGAGCG CGGTCGATGT CACCGACGCG
GCCGACTTCC GGCTCCCGAC GTACGACCCG CCGCCGGCTT GGGCCGAGGG CGCGGTGCTG
TACGAGATCT TTCCCGACAG GTTCGCGCGG TCGTCGGCGC ATCCGGTCGG CACTCTGCCG
GATTGGGCGG TTCCTGCCGC ATGGGACGAT CCGGTGGCGT ACGGGACTCC CGCCGGGACG
AAGCAGGTCT ACGGCGGAAC GTTGTGGGGC GTCGCGGAGA AGCTCGATTA CCTGCGCGGG
CTTGGGATCG ACGCGCTGTA TCTGACTCCG TTCTTTCCTT CGCGGTCCAA CCACCGGTAC
GACGCCTCGT CGTTCGACGT CGTCGATCCG CTGCTCGGCG GCGATGAGGC GCTCAAGGAG
CTCACCGCAC AGGCGCACCT GCGCGGGATC CGGGTCATCG GCGACATCAC GTTGAACCAC
ACCGGGGATC TGCACCCCTG GTTTCGGCGC GCGCAGGCCG ATCCGGCGAG TCCGGAGGCG
GGGTTCTACT ACTTCGGTGC GGATCGCAGC CAGTACGCGT CGTTCTTCGG CGTGCCGTCG
TTGCCCAAGC TGGACCACCG GTCCGAGGAG ATGCGGCGGC GGCTGTATGA GGGCCCGGAT
TCGGTGATCG CCCGGTATCC CACGGAGTTC GGGCTCGACG GCTGGCGCGT GGACGTGGCG
CAGTCGGCGG CGCGGTACGG CGCCATCGAT CTCAACGCTC GTATGGCGCG GGCGGTGCGC
GAGACGCTGC AGCGCTCGGC GCCGGAGTCG CTGCTGCTGG CCGAGCACCA GTTCGACGCC
TCGGAGACGC TGCGGGGCGA CGGGTGGCAC GGGACCATGG CCTACGCCGG GTTCACGCGT
CCGGTGCTGG GCTGGCTCGG CGCGGCGGAC AACCCGGAGT TGTGGGGCGT GCCGGGGCGG
CCGCCGGTGC ACGGCGGTGC GGAGATGGCC GCAGTGATGC GCCAGTTCTC GGCGCTGATC
CCGTGGCGCG CGGTCACGCA CAACATGACG CTGCTGGACT CCCATGACAT GCCGCGGTTC
CGATCGCTGG TCGGCGGGGC GGGGCGGCAG GCGCTGGGGG TGGCGTTGCT GATGACGCTG
CCGGGGCTGC CGATGGTCTT CGCCGGGGAC GAGGTCGGGG TGGCCGGGGC GCTGCACAAC
GAGGACGGGC GGCGCGCTTT CCCGTGGGAT GAGGGCAGCT GGGATCAGGG TACGTATGAG
GTGTACCGGT CGCTGATCGC GGTACGGCGC GAGCATGCGG CTCTGCGCTC CGGCGGGCTG
CGGTGGCTGC ACACCGCCGA GGACGTGGTG CTCTTCGAGC GCGCGCTGCC CGAGGAGACG
CTGGTGGTGC AGGTGAGCCG GGCGGCACAC GCGCCCTTGA CCGCTCCGTT CGCCGCCTCC
CATTTGCTCG GCGGACCTGA TCTGAGCCCC GGCGTTCAGC TGCCGTCCGA CGGGCCCGCG
TTCCATGTGT GGCGTGTCGA GCGCGGCTGA
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| Protein sequence | MFVRTSKSLA ARGVHVRTTP DGEPAYTEAQ VDREDGDEVW WRASVPVVNG ELGYRFLVQT
PGRRLWLNGA GLSAVDVTDA ADFRLPTYDP PPAWAEGAVL YEIFPDRFAR SSAHPVGTLP
DWAVPAAWDD PVAYGTPAGT KQVYGGTLWG VAEKLDYLRG LGIDALYLTP FFPSRSNHRY
DASSFDVVDP LLGGDEALKE LTAQAHLRGI RVIGDITLNH TGDLHPWFRR AQADPASPEA
GFYYFGADRS QYASFFGVPS LPKLDHRSEE MRRRLYEGPD SVIARYPTEF GLDGWRVDVA
QSAARYGAID LNARMARAVR ETLQRSAPES LLLAEHQFDA SETLRGDGWH GTMAYAGFTR
PVLGWLGAAD NPELWGVPGR PPVHGGAEMA AVMRQFSALI PWRAVTHNMT LLDSHDMPRF
RSLVGGAGRQ ALGVALLMTL PGLPMVFAGD EVGVAGALHN EDGRRAFPWD EGSWDQGTYE
VYRSLIAVRR EHAALRSGGL RWLHTAEDVV LFERALPEET LVVQVSRAAH APLTAPFAAS
HLLGGPDLSP GVQLPSDGPA FHVWRVERG
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