Gene Caci_5846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5846 
Symbol 
ID8337207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6751202 
End bp6751939 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID644958950 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003116545 
Protein GI256394981 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.411679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCCGG TGGATCTGGC TCGTACCGCA GGCGTGTCGA CGCAGCAAGT CCGGAACTTG 
GAAGCCGCTG GCGCGCTTCC CGAGGCGGAG CGGAGCGAGT CGGGGTATCG GCGTTACGAC
GAAAGGCATT TGGCTGCGCT CCTTGCCTAC ACGGCTCTGG TCCCAGGGCT GGGCGCGCAG
GCGGCGCGGG CGATCGTGGC GGCGGTCGGC GAGGACCGGA CGAAGGAGGC ACTGGAGCTT
GTGGACGCGG CGCACGCGGC GTTGCACCAG GGCCGCGCGT CGTTGCTGGA GATCGAGCGC
ACGTTGTCTG CGGTCGTGAA TCAGGAGCCT GCGACCGACG CCCCGGACGG GCTCAGGGTC
GGGGCGCTGG CACGGCTTTT GGGCGTGCGG ACGTCGGCGC TGCGGGTGTG GGAGGCTGCG
GGTCTGCTCG CTCCGTCGCG CGAATCAGGG ACCGGATACC GCCTCTACGG CGCGCGGGAC
GTGCGCGATG CCCGCATCAT CCAGACCCTG CGCGAGAGCT CCTACATGTT CGACCGCATC
CGGCCGATCA TCGACGGTCT GCGCCGCACC GGCGGCTCGG AGGCGCTGCT GGAAGCGCTG
GCTGAGCGCC GCCGGTCGCT CGACGAGCGT TCGGCGGCGC TGTTGGAGGG CGCCGCGCGG
CTGTGGGGCT ATGTCGGAAT GATGAGCTCG GGGGTGATGT CGCCGATGAA CACGGCGACG
TGGTCGTCCT GCGAATAG
 
Protein sequence
MRPVDLARTA GVSTQQVRNL EAAGALPEAE RSESGYRRYD ERHLAALLAY TALVPGLGAQ 
AARAIVAAVG EDRTKEALEL VDAAHAALHQ GRASLLEIER TLSAVVNQEP ATDAPDGLRV
GALARLLGVR TSALRVWEAA GLLAPSRESG TGYRLYGARD VRDARIIQTL RESSYMFDRI
RPIIDGLRRT GGSEALLEAL AERRRSLDER SAALLEGAAR LWGYVGMMSS GVMSPMNTAT
WSSCE