Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5846 |
Symbol | |
ID | 8337207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6751202 |
End bp | 6751939 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958950 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003116545 |
Protein GI | 256394981 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.411679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCCGG TGGATCTGGC TCGTACCGCA GGCGTGTCGA CGCAGCAAGT CCGGAACTTG GAAGCCGCTG GCGCGCTTCC CGAGGCGGAG CGGAGCGAGT CGGGGTATCG GCGTTACGAC GAAAGGCATT TGGCTGCGCT CCTTGCCTAC ACGGCTCTGG TCCCAGGGCT GGGCGCGCAG GCGGCGCGGG CGATCGTGGC GGCGGTCGGC GAGGACCGGA CGAAGGAGGC ACTGGAGCTT GTGGACGCGG CGCACGCGGC GTTGCACCAG GGCCGCGCGT CGTTGCTGGA GATCGAGCGC ACGTTGTCTG CGGTCGTGAA TCAGGAGCCT GCGACCGACG CCCCGGACGG GCTCAGGGTC GGGGCGCTGG CACGGCTTTT GGGCGTGCGG ACGTCGGCGC TGCGGGTGTG GGAGGCTGCG GGTCTGCTCG CTCCGTCGCG CGAATCAGGG ACCGGATACC GCCTCTACGG CGCGCGGGAC GTGCGCGATG CCCGCATCAT CCAGACCCTG CGCGAGAGCT CCTACATGTT CGACCGCATC CGGCCGATCA TCGACGGTCT GCGCCGCACC GGCGGCTCGG AGGCGCTGCT GGAAGCGCTG GCTGAGCGCC GCCGGTCGCT CGACGAGCGT TCGGCGGCGC TGTTGGAGGG CGCCGCGCGG CTGTGGGGCT ATGTCGGAAT GATGAGCTCG GGGGTGATGT CGCCGATGAA CACGGCGACG TGGTCGTCCT GCGAATAG
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Protein sequence | MRPVDLARTA GVSTQQVRNL EAAGALPEAE RSESGYRRYD ERHLAALLAY TALVPGLGAQ AARAIVAAVG EDRTKEALEL VDAAHAALHQ GRASLLEIER TLSAVVNQEP ATDAPDGLRV GALARLLGVR TSALRVWEAA GLLAPSRESG TGYRLYGARD VRDARIIQTL RESSYMFDRI RPIIDGLRRT GGSEALLEAL AERRRSLDER SAALLEGAAR LWGYVGMMSS GVMSPMNTAT WSSCE
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