Gene Caci_5841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5841 
Symbol 
ID8337202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6746059 
End bp6746928 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID644958945 
Producthypothetical protein 
Protein accessionYP_003116540 
Protein GI256394976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.322989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAC GCCTCATCAC GCGCGGCCTC GTGGCCGGCG CGCTGGCCGG CCTGGTCGCG 
TTCTGCTTCT CGCGGATCTT CGCCGAGCCG GCCATCACCA AAGCGATCGC CTACGAGAGC
GGTCGCGACG CGGCGCAGGC GGCCCTGAAC CGGGCCGCCG GCCTGCCGGT GGAAGCCGCC
GGGCCGGACC TGTTCAGCCG CACCGTGCAG AGCAACCTCG GCATCGGCGT CGGTCTGATC
GGCTTCGGCG CGGCGATGGG AGCCATCTAC GCGGTGGTGT ACCTGCTGTG CCTGGGCCGG
GTCGGCAAGA TCCAGCCGAA GGTGCTGGCC CTGCTGGTCG CCGGCGCCGG ACTGGCCGGG
ATCTACCTGG TGCCGTACCT GAAGTACCCG GCCAACCCGC CGGCGATCGG CCACCCCGAG
ACGATCAAAC CGCGCACCGG GCTGTACCTG ACCATGGTGA TCTGCTCGGT GGCGTTCATG
CTCGCCGCGA TCTGGCTCGG CCGCCGTCTG GCTCCGCGCT TCGGGAACTG GAACGCCTCG
CTGCTGGGCG CGCTCGGCTT CGCCGTCGCG ATCGGCATCG TGATGGTGAT CCTGCCCTCC
CTCGGCGAGC TGTCGGCGAA CGTGCACCTG TCCGGTCACC ACGCCACGGA GACACCCCTG
CCGCTCGCGG ATGCCAAGGG GAACATCGTT TACCCCGGCT TCCCGGCCGA CGCCCTGTTC
TCCTTCCGCT TCTACTCAAT CTGCAACCAG GTCATCTTGT GGGGCGCGCT CGCTCTGGTC
TTCGGACCGC TCGCCGAGCG CGTGCTGCGG CCGGCGATGC AGCCTGCCGA GGCCGCCGGG
GGCGCCGGCG TCGCCCCGGC GGCGGTGTGA
 
Protein sequence
MERRLITRGL VAGALAGLVA FCFSRIFAEP AITKAIAYES GRDAAQAALN RAAGLPVEAA 
GPDLFSRTVQ SNLGIGVGLI GFGAAMGAIY AVVYLLCLGR VGKIQPKVLA LLVAGAGLAG
IYLVPYLKYP ANPPAIGHPE TIKPRTGLYL TMVICSVAFM LAAIWLGRRL APRFGNWNAS
LLGALGFAVA IGIVMVILPS LGELSANVHL SGHHATETPL PLADAKGNIV YPGFPADALF
SFRFYSICNQ VILWGALALV FGPLAERVLR PAMQPAEAAG GAGVAPAAV