Gene Caci_5839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5839 
Symbol 
ID8337200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6744792 
End bp6745226 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content74% 
IMG OID644958943 
ProductRibose/galactose isomerase 
Protein accessionYP_003116538 
Protein GI256394974 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.244714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CGGTGTCGGC GGACGAGGTG GCCGGAGTGG CTGCGCAGAT CGGTCCGGAA 
CTGGAGCGCC GAGGTCACAC GGTGCTCCTG TTCGGAGCCC TGGTACCTGG CGAGCGCGCC
GATTGGGCCT GGTCCGCGGA GGCCGCCGCG CGAGCCGTCG CCGAAGGCCG CGCGGACCAG
GCGGTCGTGG CGTGCTGGAC CGGTGCCGGG GCGTCGATCG CCGCGAACAA GGTGGACGGC
GTCCGGGCGG CGCTGTGCAC CGACGCCGTG ATGGCCGACG GAGCGCGCAA GTGGGCCGAC
GCCAACGCCC TCGCCCTGAG CCTGCGCCTC ACCTCCCAGC CGCTGCTGAT GGAGATGCTG
GACGCCTGGT TCGCCGGCGC GCCGAGCCCC GATCCGGTGG ACGCGGCGAA CGTGGCGCAC
GTCGCCGAGA TCTGA
 
Protein sequence
MRIAVSADEV AGVAAQIGPE LERRGHTVLL FGALVPGERA DWAWSAEAAA RAVAEGRADQ 
AVVACWTGAG ASIAANKVDG VRAALCTDAV MADGARKWAD ANALALSLRL TSQPLLMEML
DAWFAGAPSP DPVDAANVAH VAEI