Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5823 |
Symbol | |
ID | 8337184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6727288 |
End bp | 6727755 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958927 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003116522 |
Protein GI | 256394958 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0742243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCACC TCTCACCCCG GAATAGCCCC GCGCGCCCCC GCGTCCTGAA AACCGTGACG GACGTGAACA GCTGGGCCCT GCCCACAACG CAGACCGACG AACACGGCCC CTGCGGCGAC GACGACTGCG GCATCCGCGA CGTCCAGGAC CGCCTCGGCG ACCGCTGGTC AGTCCTGGTC ATCGTGGAAC TGGCCAAAGG CACCCGACGC TTCGGCGCAC TGAAGGCGGC CATCCCCGGC ATCTCCCAGC GCATGCTCAC GGTCACCACC AAGCGCCTCA TCCGCGACGG CATGGTCGAG CGCACGGTCT ACCCCACCAT CCCGCCCCAA ACCGACTACC GCCTCACCCC CATGGGCGAG AGCTTCGCCC GGGCGGTAGC GGACCTCGCC GACTGGTCAC GCTGGCACAA AGAGGCGGTC GCGGTCGCAC GCCTGCGGTT CGATCTGGAC CATCCCGGGG AACTGTAG
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Protein sequence | MTHLSPRNSP ARPRVLKTVT DVNSWALPTT QTDEHGPCGD DDCGIRDVQD RLGDRWSVLV IVELAKGTRR FGALKAAIPG ISQRMLTVTT KRLIRDGMVE RTVYPTIPPQ TDYRLTPMGE SFARAVADLA DWSRWHKEAV AVARLRFDLD HPGEL
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