Gene Caci_5823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5823 
Symbol 
ID8337184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6727288 
End bp6727755 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID644958927 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003116522 
Protein GI256394958 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0742243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACC TCTCACCCCG GAATAGCCCC GCGCGCCCCC GCGTCCTGAA AACCGTGACG 
GACGTGAACA GCTGGGCCCT GCCCACAACG CAGACCGACG AACACGGCCC CTGCGGCGAC
GACGACTGCG GCATCCGCGA CGTCCAGGAC CGCCTCGGCG ACCGCTGGTC AGTCCTGGTC
ATCGTGGAAC TGGCCAAAGG CACCCGACGC TTCGGCGCAC TGAAGGCGGC CATCCCCGGC
ATCTCCCAGC GCATGCTCAC GGTCACCACC AAGCGCCTCA TCCGCGACGG CATGGTCGAG
CGCACGGTCT ACCCCACCAT CCCGCCCCAA ACCGACTACC GCCTCACCCC CATGGGCGAG
AGCTTCGCCC GGGCGGTAGC GGACCTCGCC GACTGGTCAC GCTGGCACAA AGAGGCGGTC
GCGGTCGCAC GCCTGCGGTT CGATCTGGAC CATCCCGGGG AACTGTAG
 
Protein sequence
MTHLSPRNSP ARPRVLKTVT DVNSWALPTT QTDEHGPCGD DDCGIRDVQD RLGDRWSVLV 
IVELAKGTRR FGALKAAIPG ISQRMLTVTT KRLIRDGMVE RTVYPTIPPQ TDYRLTPMGE
SFARAVADLA DWSRWHKEAV AVARLRFDLD HPGEL