| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5768 |
|---|
| Symbol | |
|---|
| ID | 8337129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6667897 |
|---|
| End bp | 6668343 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958872 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003116467 |
|---|
| Protein GI | 256394903 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.610006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA TGACGGCGGC TGAGCACAGG GAGCAGGCCA AGGCGCGCTA TGACGCGTTC
CTGGCGGCCT GCCCGAGCCG GCAGTTGCTC GACCGGATCT CCAACAAGTG GGTCACGCTG
GTCCTGGCCG CGCTCGGTAA CGGCAGCCCG CAACAGCTCG GCGCCGACTG CGCCGGCGAA
CCCCGGGCGA TGCGCTACTC GGAACTGGCG CGGCTGCTGG CCGGCGTCAG CCAGAAGATG
CTGACCCAAA CGCTGCGTTC CCTGGAGCGC GATGGCCTGG TGACCCGCAC CGTGACCCCG
ACCGTGCCGG TCACGGTCTC CTACGAGCTG ACCGGTCTCG GCCTGTCGCT CTACGAGACG
ATGCGCGGCG TCAAGAGCTG GGCCGAGACG CACATGGACG ATGTGTTCGC CAACCGCGAG
GGCTACGACA ACCGGGCTGC CGCATGA
|
|---|
| Protein sequence | MATMTAAEHR EQAKARYDAF LAACPSRQLL DRISNKWVTL VLAALGNGSP QQLGADCAGE
PRAMRYSELA RLLAGVSQKM LTQTLRSLER DGLVTRTVTP TVPVTVSYEL TGLGLSLYET
MRGVKSWAET HMDDVFANRE GYDNRAAA
|
|---|
| |