| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5737 |
|---|
| Symbol | |
|---|
| ID | 8337098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6616603 |
|---|
| End bp | 6617430 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644958841 |
|---|
| Product | transcriptional regulator, TraR/DksA family |
|---|
| Protein accession | YP_003116436 |
|---|
| Protein GI | 256394872 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.988125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCG TGACGACGAG CAGGACGAAG GCATCAGAGG CGGCCACGGG GGCCACGCAC
GCCGCGAAGG GCGCGGCCGG CCCGGCCGCG GCCGGTAAGG CGGTGCCCAC GCCGGCTCGG
GCCGCGACCG GCGCCAAGGC CGCGCCGCCG AACCGCCGAT CCGGCGCCGG CGAGGCGCGG
CGGTCGGCGA GCGGGCCGGC CGCTTCGGTT TCGGGCCAGG TTTCGGCCCG GTCCGCGGCG
GCAACACCTG CTGTGACCAA GACTGCCGCG ACGAAGCCCG CCGAGACGAA GCCTGCCGAG
ACCAAGCCTG CTGAGACCAA GAGCACTGCC AGAACCCCGG CGAAGCACCA GCACCCGGCG
CACGAAACCG CGGCCGCGGA GAAGGAGACT CCCATGACGG TCACGCAGAT CAGCCAGACC
ATGGCCGGCG TCGGCGGGCT GCCGCCGTAC CGGACCGGCG AGGACCCGTG GACCCCCGAG
GAGGTCGGCG AGTTGCAGGC CGAGCTCGAG GGCGACGCCG CGCGCCTGCG CCGGGAGATC
AGCACCGCCG AGACCGGCAT CGCCGACCTG CTCCGGGACT CCGGCGAGGG CGCCGGCGAC
GACCAGGCCG ACGCCGGTAC CAAGAACTTC GAGCGCGAGC ACGAGATGGC GATAGCGAAC
AACGCCAGGG AGATGCTCCA GCAGACCGAG CGGGCGCTGG CCCGGCTGGC GGCGGACACG
TACGGGGTGT GCGAGTCCTG CGGCGAGCCG GTCGGCAAGT ACCGGCTGCA GGCGTTCCCG
CGGGCCACGC TGTGCATGAG CTGCAAGCAG AAGCAGGAGC GGCGCTGA
|
|---|
| Protein sequence | MTAVTTSRTK ASEAATGATH AAKGAAGPAA AGKAVPTPAR AATGAKAAPP NRRSGAGEAR
RSASGPAASV SGQVSARSAA ATPAVTKTAA TKPAETKPAE TKPAETKSTA RTPAKHQHPA
HETAAAEKET PMTVTQISQT MAGVGGLPPY RTGEDPWTPE EVGELQAELE GDAARLRREI
STAETGIADL LRDSGEGAGD DQADAGTKNF EREHEMAIAN NAREMLQQTE RALARLAADT
YGVCESCGEP VGKYRLQAFP RATLCMSCKQ KQERR
|
|---|
| |