| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5717 |
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| Symbol | |
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| ID | 8337078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6597400 |
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| End bp | 6599262 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958821 |
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| Product | ABC transporter related |
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| Protein accession | YP_003116416 |
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| Protein GI | 256394852 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.632207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CGGTCGCCGA ACTCGACGAT GTCGAAGAGG GCGAAGGGGG CGAACTGGGC
ACAGAGAACG CCGTCGCGCC CGGGGGCGGC TATCAGCTTC CTGAGGCCCT CGACGGCGGC
TACGCCGTCC TGCGCCGCGG CGTCCGGCTG GCTCCGGCGT TCACCAAGGG TTTGGGCGTC
ACGCTCGCCC TGGCGCTGAT CGCCACCGTC GGCCGGATCG TGATCCCGCT GACCGTGCAG
CAGACGCTGG ACCACGGCAT CCTCGCCGAG GGCGGTCCCG ACTACGGCGA GGTGCGCACC
ATGGTCGCGC TCAGCGCCGT GGCGGTGCTG ATCACCGCGG TGTCGGCGTA CCTGATGAAC
TTCCGGCTCT ACACCTCCAG CGAGCGCGGG CTGGCCGAGG TGCGGACCAA GGCCTTCCGG
CACGTGCACG ACCTCTCGCT GCTGCACCAG CAGGCCGAGC AGCGCGGCGC GCTGGTCAGC
CGGGTCACCA GCGACATCGA CACGGTCACC GTGTTCATCC AGCAGGGCGG CATGCAGCTG
TTCGTCGCCG TTGCGCAGGT CGTGGTGGTC ACGATCGTGA TGGCGGTGTT CTCCTGGCAG
CTCACGATCC TGGTCTGGGT CTGCTTCGTG CCGATGTTCC TGGTCATGCG CAAGATCCAG
GGCCGGACCG GACGCGCCTA CCGCAAGGTC CGGCGACGCT ACGGCAGGAT GCTCGGCGAG
GTGTCCGAGG CGCTGGTCGG CGCCGACGTG CTGCGCGCCT ACGGCATCGA GGACCGCGCC
GGCGCCCGGA TCGGCGCGGC GGTCGAGGAC ACCCGCGACT CCCAGGTCCG CACCCAGCGG
CTGATCGTCG TCACCTTCTC CATGGGCGAG CTGGTCGCCG GGCTGGTGAA CGCCGCGATC
GTGGTGGTCG GCGTGATGCT CGGCGTCGGC GGGCACCTCT CGGTCGGCGA CCTGACCGCG
ATGCTCTTCC TGGTGAACCT GTTCATCTCC CCGGTGCAGT TCGCCACCGA GCAGCTGAAC
GAGGCGCAGA ACGCGATCGC CGGCTGGCGC CGCATCGTCG GGCTGCTGGA GCAGCCGCCG
GACGTGGTGG ATCCCGGCCG GGCCGGCGTC ACGCCGCCGG ACGGTCCGCT GGGCGTCGGC
TTCGAAGAGG TCGTGTTCGC CTACCCAGGC GGTACCCCGG TACTGCACTC GCTGACCACC
GAGATCACGC CGCGCACGCG GGTGGCGGTG GTCGGGGAGA CCGGCTCGGG CAAGACCACC
TTCGCCAAGC TGCTGACCCG GCTGATGGAT CCCAGCTCCG GCAGGATCCT GATCAACGGC
GTGCCGCTGA AGGACATCGG CTTCGAGACG CTGCGCTCGC GCATGGTGAT GGTCCCGCAG
GACGGGTTCC TGTTCGACAT GACCGTCGGC GACAACGTCC GCTACGGCAA GCCCGGCGCC
ACCGACGCCG AGGTGCGCCG GGCGTTCGAG GACCTGAGCC TGACCGACTG GCTCGACGGG
CTGCCGGAGG GCATGGCGAC CCGGGTCGGG CAGCGCGGGG AGTCGCTGTC GGCCGGCGAG
CGGCAGCTGG TCGCGCTGGC CCGGGCCTAC ATCGCCGATC CGGACCTGCT GGTGCTGGAC
GAGGCGACGT CGGCGGTGGA CCCGGCGACC GAGGTGCGGA TCACCCGGGC GCTGGACGGG
CTGACGCGCG GGCGGACGTC GATCGCGATC GCGCACCGGC TGTCCACGGC GGAGGCCGCG
GACGAGGTGT TCGTGTTCGA CGCCGGACAG ATCGTGGAGC GCGGGCCGCA CCGGGAGCTG
GTGGGCGCCG GCGGGGTGTA TTCGGGACTG TATGAGAGCT GGTCCCGGCA GCAGGCTTCG
TAG
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| Protein sequence | MSTAVAELDD VEEGEGGELG TENAVAPGGG YQLPEALDGG YAVLRRGVRL APAFTKGLGV
TLALALIATV GRIVIPLTVQ QTLDHGILAE GGPDYGEVRT MVALSAVAVL ITAVSAYLMN
FRLYTSSERG LAEVRTKAFR HVHDLSLLHQ QAEQRGALVS RVTSDIDTVT VFIQQGGMQL
FVAVAQVVVV TIVMAVFSWQ LTILVWVCFV PMFLVMRKIQ GRTGRAYRKV RRRYGRMLGE
VSEALVGADV LRAYGIEDRA GARIGAAVED TRDSQVRTQR LIVVTFSMGE LVAGLVNAAI
VVVGVMLGVG GHLSVGDLTA MLFLVNLFIS PVQFATEQLN EAQNAIAGWR RIVGLLEQPP
DVVDPGRAGV TPPDGPLGVG FEEVVFAYPG GTPVLHSLTT EITPRTRVAV VGETGSGKTT
FAKLLTRLMD PSSGRILING VPLKDIGFET LRSRMVMVPQ DGFLFDMTVG DNVRYGKPGA
TDAEVRRAFE DLSLTDWLDG LPEGMATRVG QRGESLSAGE RQLVALARAY IADPDLLVLD
EATSAVDPAT EVRITRALDG LTRGRTSIAI AHRLSTAEAA DEVFVFDAGQ IVERGPHREL
VGAGGVYSGL YESWSRQQAS
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