| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5689 |
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| Symbol | |
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| ID | 8337050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6564726 |
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| End bp | 6566093 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958793 |
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| Product | L-seryl-tRNA selenium transferase |
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| Protein accession | YP_003116388 |
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| Protein GI | 256394824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGG CGCTCGGCGA GTCCGATCCG CGCCGGTCAG TCCCGCGTAC GGACACCCTC
CTGGCAGATC CGCGCTTGAA GCATGCAGCG GCGACACTGG GGCCGCAGGC GGTGAAGCTG
GCAGTGCGTT CGGCCCAGCA ACAGGTCAGA ACCGGTCTGG CGGCCCCGGC CGACGCCGCG
GACCTGGCGC TGGCCCTGCT TGCGACCGCA CCGGTCACAC TGCGGCCCGT GGTCAACGCG
ACCGGCGTGG TGCTGCACAC CAATCTCGGA CGGGCGCCGC TGTCGGCGGC GGCGGTCGAG
GCGATGAGCC GCGCCGCGGG ATATGTCGAC GTGGAGTTCG ACCTCGAAGC AGGCGGACGG
GCCGGGCGCG GCCGGACGGT GAAGGCCGCG TTGCTGGCCG CGGTGCCCGC CGCCGAGGAC
GTCCACATCG TCAACAACGG CGCCGCCGCG CTCGTGCTGG CGGCCTGTGC TCTGGCCGGT
GGTCGCGAGA TCGTCGTCAG CCGGGGCGAG CTGGTGGAGA TCGGCGACGG TTTCCGTATC
CCGGACCTGC TGACCGCCGC CGGCGCCGTC CTGCGGGAAG TCGGCACGAC CAACAGGACC
CATCTGCGTG ACTATGCCGA GGCGATCGGA CCGGCCACGG GGTTCATCTT GAAGATCCAT
CCCTCCAACT TCCGGATCGA GGGCTTCACC AGCTCGGTGC CGGTCGCCGA GTTGTCCGGC
CTCGGAGTCC CGGTGGTCGC GGACATCGGT TCCGGACTGC TCGGGCCGCA CCCTCTCCTG
CCCACCGAGC CTGATGCCGG GACCTGGCTG TCACAAGGTG CTGATGTGGT CACCGCCAGC
TGCGACAAGC TGCTCGGCGG TCCTCAGGCC GGCCTGATCC TGGGGAGCGG GGAGAGGGTG
GCGGAAATGC GCCGTCATCC GATGGCGCGG GCGCTGCGGG TGGGCAAGAC CACGCTGGCG
GCGCTGCAGG CCACGGTCGG TGGTCATGAG ACGCCGGTCG AGGCGGCGTT GACGGCTGAT
CGCGAGGTGT TGAGGGTTCG GGCGGACGCC ATGTCGACGG CATTGACCTC CTCCGGGGTC
CAGGCTGAGA CGGTTGCCAG TGCTGGGGCC GTCGGCGGTG GCTCGGCGCC GGGTGTGACT
CTGCCGGGCT GGGCCGTGCG GGTACCGGAG CAGTTCGCAG AGCCGCTGCG GATCGGGGAG
CCTTCGATCG TCGGCCGCGT CGAGCACGGC TTCTGCCTGC TGGACCTGCG GTGTGTTCCG
GCCGCGCTGG ACGAGCAGGT GTGCGCGGCG GTGCTCGCGG CCGGTCGGCG AGCCGCCGGC
CGCCCGGGCC GTCGGCCGCC GGAACTGACG GCGGCATCGT GTACGTGA
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| Protein sequence | MAGALGESDP RRSVPRTDTL LADPRLKHAA ATLGPQAVKL AVRSAQQQVR TGLAAPADAA
DLALALLATA PVTLRPVVNA TGVVLHTNLG RAPLSAAAVE AMSRAAGYVD VEFDLEAGGR
AGRGRTVKAA LLAAVPAAED VHIVNNGAAA LVLAACALAG GREIVVSRGE LVEIGDGFRI
PDLLTAAGAV LREVGTTNRT HLRDYAEAIG PATGFILKIH PSNFRIEGFT SSVPVAELSG
LGVPVVADIG SGLLGPHPLL PTEPDAGTWL SQGADVVTAS CDKLLGGPQA GLILGSGERV
AEMRRHPMAR ALRVGKTTLA ALQATVGGHE TPVEAALTAD REVLRVRADA MSTALTSSGV
QAETVASAGA VGGGSAPGVT LPGWAVRVPE QFAEPLRIGE PSIVGRVEHG FCLLDLRCVP
AALDEQVCAA VLAAGRRAAG RPGRRPPELT AASCT
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