| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5686 |
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| Symbol | |
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| ID | 8337046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6560384 |
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| End bp | 6561622 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958789 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003116385 |
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| Protein GI | 256394821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGACCA TCAACCGAGT GCGGGCTGGC GCTGTCATCG TCGCCGGCGT GCTCGCGCTT
TCGGCTTGTG CGGGGAGCTC GTCGAAGTCC GGAGGGGGCT CCTCGTCGAG CTCGACCGGC
GCCGGCAGCA GCAGCTCCAC GTCAGCGGCC AATAACAGCA AGCCCACGCT GGAGATCGGC
GTGCAGGGCC CGCTCTCGGG CTCCAACCAG GCTCTGGGCC TGAACATCGA CTGGGGCGTC
AAGCTCGCCA TCCAGGAGGC GAACGCCAAG GGCGACCTGC CGTTCAACCT GTCGATCAAG
GAGTCCGACG ACCAGGGCGA CCAGTCGCAC GGCGCGACCG CCGCGCAGCT GCTGATCCAG
GACTCGAAGG TGCTGGGTGT CGTCGGGCCG GCCTTCTCCG GTCCCTCGGC CGCGGCCGGT
TCGCTGTACT CCTCGGCCAA CCTCGTGGCG ATCAGCCCGT CGGCGACCAA CCCCAAGCTG
ACCGCCTCCG GCTTCAAGAC GTTCTATCGC GTCGTGGCCA ACGACAACAT CCAGGGTAAA
GCCGCCGCCG ATTACATGGT CAAGGGGCTC AAGGCCACCA ACGTCTACGT GGTCGACGAC
AAGACGCAGT ACGGCCAGGG TCTGTCCACC GCGATCGTCG CCGAGCTGAA GCAGGACGGC
GCCACCGTCG AGACCGACAG CGCGCCGCAG GGCACACAGG ACTATTCGCA GCTGGCTTCC
AAGGTCGCCG GCTCGGGTGC CAAGGCCATG TACTACGCGG GCTACTACGC CGACGGCGGC
GTGTTCGCCA AGGCGCTGAA GGCCGCCGGG TTCGGCGGCA CGATGGTGTC CGGTGACGGG
TCGAAGGACC CGAACTTCGT CACCACCGCG GGTAAGGATG CCGCGGAGGG CTGGCAGTTC
ACCTGTGCCT GTCTGGACAC CGGCACCGAC GCCAAGTACG CGCAGTTCGT CACGGACTAC
AAGAAGCTGG CCAACGCCGC CCCGGGCACC TACTCCATCG AGGGCTACGA CGCGGCCAAC
ACCATCATCA GTGTGCTGAA GAGCCTGAAC ACCGCGAGCC CGACCCGCCA GCAGGTGGCC
GACGCGGTGG GCAAGGTGGA CTACCAAGGC CTGTCCAAGG AGGTCAAGTT CACCCCCAGC
GGTGACATCT CGGGTACGTC GGTCTACGCC TACAAGATCA CCGGAGGCGT GATCACGCTG
ATCGGCGACA TCTCGAAGAT GCCGGGTATC GGCAGCTGA
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| Protein sequence | MRTINRVRAG AVIVAGVLAL SACAGSSSKS GGGSSSSSTG AGSSSSTSAA NNSKPTLEIG
VQGPLSGSNQ ALGLNIDWGV KLAIQEANAK GDLPFNLSIK ESDDQGDQSH GATAAQLLIQ
DSKVLGVVGP AFSGPSAAAG SLYSSANLVA ISPSATNPKL TASGFKTFYR VVANDNIQGK
AAADYMVKGL KATNVYVVDD KTQYGQGLST AIVAELKQDG ATVETDSAPQ GTQDYSQLAS
KVAGSGAKAM YYAGYYADGG VFAKALKAAG FGGTMVSGDG SKDPNFVTTA GKDAAEGWQF
TCACLDTGTD AKYAQFVTDY KKLANAAPGT YSIEGYDAAN TIISVLKSLN TASPTRQQVA
DAVGKVDYQG LSKEVKFTPS GDISGTSVYA YKITGGVITL IGDISKMPGI GS
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