Gene Caci_5675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5675 
Symbol 
ID8337035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6546216 
End bp6547382 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID644958778 
Productglycosyl transferase group 1 
Protein accessionYP_003116374 
Protein GI256394810 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.333063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTAG CCATCCTGAA CTGGCGTGAC CCGTGGCAGC GGAGCGCCGG GGGAGCGGAG 
GCTTTCGCCC ACGAGGTCGC CCGCGGATTC GTCGCACGCG GCGACACCGT CGACTTCCTC
ACCTCCCGCG AACCCGGCCA GCCGCGAAGC GAGCTGCACG AGGGCATCCG ATGGCTGCGA
CGCGGCGGAC GCTGGACGGT CTACGCGGGC GTGTTCGGCC GCCTGATCAG GGCTCGATTA
CGCGGGCCCG CCTACGACTT CGTGATCGAC TGCCAGAACG GCATCCCGTT CTTCTCGCCC
CTGGCCGTGT CCCGACGCCG CACCGGCGTG GCGATCGTCG TCCACCACGT CCACGACGAG
CAGTTCGCCA CCCACTTCAG CCGCCCGCTC GCCGCCCTCG GACGCTGGCT GGAGGGACCG
GCGGCCCGCC AGGTCTACCG GCGCCACACA GCGGTGGCGG TCTCAGAGTC CACCATCACG
GCGATGCGGA CCCGCCTGCG CTGGACCGGA GCGATCGAGC TCATTCACAA CGGCGTTGCC
ACAGAAGGCT TTCAGCGCCT GTCTCTACCT CCAGCCTTGC CACTGGCTTC GGCATCAGCT
CCTCGACTGG TCGCCGTCGG CCGCCTGGTC CGGCACAAGC GCCTGGAGCA CGTCCTCCAC
CTCGCCGACG ACCTGGCGGA AACCTGGCCC GGCATCGAGA TCCACATCAT CGGCCGCGGT
CCCGACGAGT CCCGGATCCG GGAAGCCGCA TCGCGCCTGC ACCACGCCGA TCGCGTCCAC
ATCCACGGCC ACCTCGCCAC CCAGGCCAAG AACCACCTCC TGCAATCGGC CTGGCTCCAC
CTGTCCGCCT CCCAAGGCGA AGGCTGGGGA CTGTCGGTAC TGGAGGCCGC GGCGCTCGGC
GTGCCGACCG TCGCCTACGA CGTCGACGGT CTGCGCGACG CCATCCGCGA CGGCGTCACC
GGCTGGCTCG TCCCCCCGGG GGACACGCTC GCCGACACCG TCTCCGGCGT CCTGAAGGAG
CTCGACAGCG ATCCGGAGAG GGCGTCGGAG GTGAAGGGGG CATGCCTGGC GTGGGCGGCC
CGATTCGACT GGGAACGCAC GCGCAACGCG ATGGCGCAGT TGGCCGTCAG GAACTCCCGC
GCCCCCGGCA CACGCACGAT CGAGTGA
 
Protein sequence
MRVAILNWRD PWQRSAGGAE AFAHEVARGF VARGDTVDFL TSREPGQPRS ELHEGIRWLR 
RGGRWTVYAG VFGRLIRARL RGPAYDFVID CQNGIPFFSP LAVSRRRTGV AIVVHHVHDE
QFATHFSRPL AALGRWLEGP AARQVYRRHT AVAVSESTIT AMRTRLRWTG AIELIHNGVA
TEGFQRLSLP PALPLASASA PRLVAVGRLV RHKRLEHVLH LADDLAETWP GIEIHIIGRG
PDESRIREAA SRLHHADRVH IHGHLATQAK NHLLQSAWLH LSASQGEGWG LSVLEAAALG
VPTVAYDVDG LRDAIRDGVT GWLVPPGDTL ADTVSGVLKE LDSDPERASE VKGACLAWAA
RFDWERTRNA MAQLAVRNSR APGTRTIE