| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5650 |
|---|
| Symbol | |
|---|
| ID | 8337010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6511105 |
|---|
| End bp | 6511911 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116350 |
|---|
| Protein GI | 256394786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.429578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG TCCCGGCGCT CGATCCGTTG AGCTATCCCG GTCGGGTCGT CGATGGGCCC
GCGCTGCTCA GCGGGACGCA GCTGCTGCGG ATGACGCCGA CTGCCGAGCC GATCGGGCGC
TGGCGCGTAC ATCAGGACAC GAACCCAGCT TGCAGCCTGG ACGACGTACT CGCCGACCTC
GACTCGCCGC CGACCAGCGA ACGCCATCCG CTGATCGCCG TCGGTTCCAA CGCCGCACCA
GCCCAGCTGC ATCACAAGCT GACTCGCCTC GGCCTGCCCG CCGTCGTCCC GATGACGCCG
CTGCGCGTGT CGGGGCTCGG TGTCGGCGTC TCGGCACATG TGGCGCTCAA CGGATACGTC
GCCAACTCCC CGTTCGCCGA CCCGGACAGC ACGGCCGACG TCGTGCTGAC TTTCCTGGAC
GCCGACCAGC TTTGCGCCGT GGACGACACC GAACTCCCGC GGTATCACAG GGTTCTGTTG
TCGGGTGCGG AGTTTGATAT GACGCTGCCG TCGGGGGAGC GCGTGGACAC CGCGTATCTG
TACGTCAACG CCGCAGGGGT GCTCGCCGCG CGGGACGGGA CGCCACGCGT TCCCGGCGCA
CAGGAAGCGC TGCTCGCTGA GTTGCTGGAG CGTTCGCCAC GCCTGCGCGC GCTGTTCGAC
TCCCCACAAG ACTGGATCGC CAAGGCGCGC GCTGACGCCG ACCTTCGTGC CACCGTGAAG
CAGATCTTCC ACGAGTCGGG CTGGGTCCTC CGGCAGGAGG CATGGCGCGA GGTCTCGCCT
CTGGCGACCA GCGGCGACCA CCCGTAG
|
|---|
| Protein sequence | MDGVPALDPL SYPGRVVDGP ALLSGTQLLR MTPTAEPIGR WRVHQDTNPA CSLDDVLADL
DSPPTSERHP LIAVGSNAAP AQLHHKLTRL GLPAVVPMTP LRVSGLGVGV SAHVALNGYV
ANSPFADPDS TADVVLTFLD ADQLCAVDDT ELPRYHRVLL SGAEFDMTLP SGERVDTAYL
YVNAAGVLAA RDGTPRVPGA QEALLAELLE RSPRLRALFD SPQDWIAKAR ADADLRATVK
QIFHESGWVL RQEAWREVSP LATSGDHP
|
|---|
| |