Gene Caci_5569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5569 
Symbol 
ID8336929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6418787 
End bp6419311 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID644958673 
ProductATP/GTP binding protein 
Protein accessionYP_003116269 
Protein GI256394705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.004333 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTAT GGCTCAACGG CACTCACGGC TCCGGCAAGT CGACCACCAG TCCGCTCGTG 
CAGCAGCTGA TCCCGGATTC GCGGGTGTTC GACGCCGAAA AGGTCGGCGA GACGCTCATG
GACATCACGC CGGGGCTGCC CGAGACGGAC AACTTCCAGC ACTGGCCGCC GTGGCGACCG
CTCGTCGTCG AGACCGCGCG CCGCGTCCTG GACTACACCG GCGGCACTCT GGTGATCCCG
ATGACGGTCC TGGTCGAGCA GTACTGGCGT GAGATCAGCG CCGGGCTGGC CGACCACGGC
ATCCCGGTCC GCCACTTCGT CCTTCACGCC GACCAGGACA CCCTCCGCGG ACGCATCGCA
GGCGACATGG TGCTCGGCCC GAACTCCCCG TTCCGCCTCC AGTACCTCGA GCCCTACGCC
GAGGCGGCCC GCACCTGGCT GCACCGCGAG GCCGAAGTCA TCGACACCAC GCGTCTGACG
CCCGCCGAAG CCGCGCTGCA GATCGCCGAA GCCGTCAAGA ACTGA
 
Protein sequence
MIVWLNGTHG SGKSTTSPLV QQLIPDSRVF DAEKVGETLM DITPGLPETD NFQHWPPWRP 
LVVETARRVL DYTGGTLVIP MTVLVEQYWR EISAGLADHG IPVRHFVLHA DQDTLRGRIA
GDMVLGPNSP FRLQYLEPYA EAARTWLHRE AEVIDTTRLT PAEAALQIAE AVKN