| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5502 |
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| Symbol | |
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| ID | 8336862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6348012 |
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| End bp | 6349601 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958606 |
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| Product | hypothetical protein |
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| Protein accession | YP_003116202 |
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| Protein GI | 256394638 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02677] conserved hypothetical protein TIGR02677 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000845668 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000369985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCGAAC CCGACAACTC GGCTCAGTCG TCTGTCCAGG CCGCCGCGTT CGGACTTGAC
GCACTGGCGG TTGGCGACCG GTTCAAGCTC TTCAATTTCA CTCGCCGGGG CGATCACTAT
CTGTGGATCT TGCGGGCCAT GGACCGCCTG CGGGAAGTTC GAGTTCCCCA AGCCCATAGC
GATGACGTCG CCCGTGCGCT TGTCGAACTT TCGGTCGACT ATCCCGATGC TCCGCGAACC
GTCGATAACC TCCGGGCCTG TCTCGACCAG CTCGCAGACG AGAACGAGGA CCGAGTCTTA
CACCGGCTGG AGGATGCGGC CCGTACCGGT TCGCTCGCCG GCTATCGAAA CCGGCAGTCG
GTTTACCAGT TCTCCGACCT GGGGTACTCG GCATACCTAG CGGTCGAGGC GGTCTTGGGC
GCCCGGTTCG AGGACGCGAA CCTGTCCCGG CTCATTGTCT CGGACATCCT GCGCGACCTG
AACGACCTCG CGAAGGCCAA CCGCGAAGGC AACGGTCCCG AGGTCGCACG CCGTCTGCGT
TCTCTCGACG CCGCAGTAGA GGACATGGCT CGGCGCTCGG CGCGATTCCA CCTGGCGCTC
GGCGAGATCA TGCGTTCCTC GGACGCCAGC CCGGAGAAGT TCCTGGAGTT CAAGAGGGCG
CTTCTTGTCC ATATGAACGA TTTCATGGCA GAGCTGGACC GGTACTTGCC GCGCCTGTCA
GAGGCAGTGG CGGCTGTGGA GGCCACCGGG ATCGCGACGC TGTTGAACCG AGCCGCGGAG
GCCGACGACC GGCCGTTCAT GCGTATCGAC GCCCTGATCG AGGACTGGCG GCGGCGCTGG
TTCGCGGCAC GAGCGTGGTT CGCGCCGGAC GAGGCCGGCA GGGTGCCGCG TACTGAACAG
TTGCGGGAGG TCACCGGCAC GGCGGTGTCC AGCGTGCTGG CTCTCTTGCG TCAGATCACC
GAGACGCAGC GTCGAGGGGT GAACCGCGGT ACCGAACTAC GCCATCTGGC CGCATGGGTG
TTTGATTGCC CCGACGATCA GGCAGCGCAT GCCCTGATGG CGGCCGCGTT CAATGTGCGT
TCGGCGCGGC ACCTCGGCGG CGTCCATGAG GACGAGGAGC TGATCCCAGA TGCCTCGACA
TGGTGGCAGG CACCCGGGGT CGAAGTCTCG GTGAGCTTGT TCCGCAAGGG TCGTGCCCCA
AAGGCCAGCC CTCCACAGAA GGTCGCCGAG CGGAACGCTG TCCGCGCGGC CCTTCGCGAG
AAGCAACGGG CCGATCGCGC CGCCGAGCGT GCGGCGACAG AACGCCTGGT GGCTGAAGGT
CCGCACGACA TTGCACTCGA TGAGGAGCAG GTCGGCGTCC TCCTCAAGCT GCTGACCAGG
GCGCTGGAGT CCCGGACGGT CGTCGCCGGA CGCCTGGTCG GGTCCAGCTG CGCCACGGAT
GTCGCTGTGC TGCGGCTGTC GCCGTCGCCA ACTGGCAGCA CAGTGCGTAC ACCAACCGGG
ACCCTGTACT TGGCGGGCTT CCAGGTAGAG ATCAAGCCGG CCCGCGATGG CCGAATCCTC
GGCGCGAACG TTACGGAAGG CAGTGTCTGA
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| Protein sequence | MPEPDNSAQS SVQAAAFGLD ALAVGDRFKL FNFTRRGDHY LWILRAMDRL REVRVPQAHS
DDVARALVEL SVDYPDAPRT VDNLRACLDQ LADENEDRVL HRLEDAARTG SLAGYRNRQS
VYQFSDLGYS AYLAVEAVLG ARFEDANLSR LIVSDILRDL NDLAKANREG NGPEVARRLR
SLDAAVEDMA RRSARFHLAL GEIMRSSDAS PEKFLEFKRA LLVHMNDFMA ELDRYLPRLS
EAVAAVEATG IATLLNRAAE ADDRPFMRID ALIEDWRRRW FAARAWFAPD EAGRVPRTEQ
LREVTGTAVS SVLALLRQIT ETQRRGVNRG TELRHLAAWV FDCPDDQAAH ALMAAAFNVR
SARHLGGVHE DEELIPDAST WWQAPGVEVS VSLFRKGRAP KASPPQKVAE RNAVRAALRE
KQRADRAAER AATERLVAEG PHDIALDEEQ VGVLLKLLTR ALESRTVVAG RLVGSSCATD
VAVLRLSPSP TGSTVRTPTG TLYLAGFQVE IKPARDGRIL GANVTEGSV
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