Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5464 |
Symbol | |
ID | 8336822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6301995 |
End bp | 6302519 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958566 |
Product | dual specificity protein phosphatase |
Protein accession | YP_003116164 |
Protein GI | 256394600 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.160869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000857029 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGGACGA CTGGGCGCGG GCGGGATCAC GGCGACTGGG ACGACGTCCC GCGTGAGCCG TGGTCGGAGG TGGCGCCGCG GCTGTGGATG GGCGGCCACG AGTACATAGC GGGCGACGGG GAGTGGACTA CGGCTGTAGT GGCCGACCAG TTCGACGTCG TCTATAGCCT GCACTTCAGG GAGGGGTACG GACCGGGCAC CGGAGTGGAC CACCATGTGC TGGAGGTGCC AGACGACGTG CTGACTGCGC GACAGATCTT CGCAGTGGAG AAGTTCGCGG CGTCGGCGGC GCTGGACTAC GCCGCCGGGC GGCGGGTGCT GGTGCGGTGC CGGGCTGGGA TGAACCGCTC GGGGCTGGTT GTCGCTGAGG TGCTTATACG GTGCGGCTAT ACAGCTCCGG ACGCTATAGC GATGATCCGC AGGCGGCGTG CGGCTGGGGC GCTGAGCAAC CTGTCTTTCG TGGCGTACCT GGAGACCGGG TTGGGGCTGG CGGCTGAGCT TTCGGCGCTG GGGACCGGTA GCTGA
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Protein sequence | MRTTGRGRDH GDWDDVPREP WSEVAPRLWM GGHEYIAGDG EWTTAVVADQ FDVVYSLHFR EGYGPGTGVD HHVLEVPDDV LTARQIFAVE KFAASAALDY AAGRRVLVRC RAGMNRSGLV VAEVLIRCGY TAPDAIAMIR RRRAAGALSN LSFVAYLETG LGLAAELSAL GTGS
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