| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5462 |
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| Symbol | |
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| ID | 8336820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6299969 |
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| End bp | 6301231 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958564 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_003116162 |
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| Protein GI | 256394598 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0022197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00568938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGACA TCGTCGATGA CCTGAAGTGG CACGGGCTGC TGGCCCTGTC CACGGACGAG
GACGCGCTGC GTAAAGCGTT CGCCGACGGA CCGGTCATCT TCTATGTGGG CTTCGACCCG
ACCGCTCCCA GCCTGCACTT CGGCAATCTG GTCCAGATGA TCGCCGCCCG GCGCCTCCAG
GAGGCCGGCC ACACGCCGCT GATCCTGATC GGCGGCTCGA CCGGACTGAT CGGCGATCCC
AAGCCGAACG CCGAGCGCAC GCTGAACAGC AAGGAGACGG TCGCGGAGTG GGTCGTCCGG
ATCCGTGACC AGGTCTCCCG CTTCATCTCC TTCGAGGGAC CCAACGCCGC GCGCGTGGTG
AACAACCTCG ACTGGACCGC GCCGATGTCC GCGATCGACT TCCTGCGGGA CATCGGCAAG
CACTTCCGCG TCGGGAAGAT GCTCTCCAAG GACGCGGTGA GCGCGCGCCT GAACTCCGAA
GCCGGAATCA GCTACACGGA GTTCAGCTAC CAGGTCCTCC AAGGGATGGA CTACTTGGAG
CTGTACCGGC AGTACGGCTG CACCCTGCAG ACCGGTGGCA GCGACCAGTG GGGCAACATC
ACCGCCGGCG TCGACCTGAT CCACAAGGCC GAAGGCGTCT CGGTACACGC ACTGGCGACA
CCGCTGCTGC TTAAGGCGGA CGGTACGAAG TTCGGCAAGA CCGAGTCCGG CACAGTGTGG
CTCTCCGGGG ACCTCATGAC GCCGTACGCG TTCTACCAGT TCTTCCTGAA CTCCGAAGAC
GCGATGGTGA TCAGCTACCT GAAGGTCTTC AGCTTCCGGT CCCGCGAGGA GATCGAGGAG
TTGGAACGCC TGACGATGGA GAAGCCACAG ATGCGCGCGG CGCAGAAGGC GCTCGCCGAG
GAGGTCACGA CGCTGGTGCA CGGAGCCGAG GCGACCGCAC AGGTGATCGC GGCGTCCAAG
GCGCTGTTCG GGCAGGGCGA CCTGACCGAG CTCGACGAGC CCACCCTGCG TGCGGCGCTG
TCCGAGCTGC CCGGCACGAA GACCGCCGAA CTGGTGCCCG TCGCCCAACT CCTGGCCGAC
ACCGGCCTGG TCGTCAGCCG CGGCGCCGGC CGCCGCACCA TCAACGAGGG CGGCGCGTAC
GTGAACAACC GCAAGATCGA GGCCGAGGAC GAAGCGCCGA CCAAGGAGGA CCTCCTCCAC
GGCCGCTGGC TGGTCCTCCG GCGCGGCAAG CGGACCCTCG GCGCGGTCGA AGTCGGGGAC
TGA
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| Protein sequence | MTDIVDDLKW HGLLALSTDE DALRKAFADG PVIFYVGFDP TAPSLHFGNL VQMIAARRLQ
EAGHTPLILI GGSTGLIGDP KPNAERTLNS KETVAEWVVR IRDQVSRFIS FEGPNAARVV
NNLDWTAPMS AIDFLRDIGK HFRVGKMLSK DAVSARLNSE AGISYTEFSY QVLQGMDYLE
LYRQYGCTLQ TGGSDQWGNI TAGVDLIHKA EGVSVHALAT PLLLKADGTK FGKTESGTVW
LSGDLMTPYA FYQFFLNSED AMVISYLKVF SFRSREEIEE LERLTMEKPQ MRAAQKALAE
EVTTLVHGAE ATAQVIAASK ALFGQGDLTE LDEPTLRAAL SELPGTKTAE LVPVAQLLAD
TGLVVSRGAG RRTINEGGAY VNNRKIEAED EAPTKEDLLH GRWLVLRRGK RTLGAVEVGD
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