| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5410 |
|---|
| Symbol | |
|---|
| ID | 8336764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6234887 |
|---|
| End bp | 6235513 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958508 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003116110 |
|---|
| Protein GI | 256394546 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.999676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCC GCGACGTACC CGAGAAGTGG CCTGTGCTGG CCTCGGAGGA GAAGTTCCGC
GGGCACGTGA TCTCGATCCG CACCGACACC GTGAAGATGG TCGACGGCAA GGTTGCCGAG
CGCGACTACG TCGTGCACCC CGGCGCGGTC GGCGTGGTGG CCCTGGACGA GGCGGACCGC
GTGCTGCTGG TCCGCCAGTA CCGGCATCCG GTCGGCTGGC GCCTGTGGGA GCTCCCCGCG
GGCCTGCTGG ACCACCCCGG CGAGAACCCC CTCGAGGCCG CCAAGCGCGA GCTCTACGAG
GAGACGCACC AGCAGGCCGA CGACTGGCGC GTCCTGGTCG ACCTGTTCAC CACCCCCGGC
GGCTCCGACG AGGCGATCCG CGTCTACCTG GCGCGCGGCG TCCGGGAGGC CGACGGCGAG
CAGTACGCCC GCGAACACGA GGAAGCCGAC ATGGCTGCGG TCTGGGCCGA CCGCGCCGAG
GTGACCAGGC TGATCCTGGC CGGCGAGCTG CACAACCCGC TCACCGTCGC CGGCGTGCTC
GCCCTGACCA CGGCGATCAG CACGAACGCG CTGGACGATC TGCGGCCGGC GGACGCGCCG
TGGCGGCAGA GGCCTTTCCT GCCTTAG
|
|---|
| Protein sequence | MEIRDVPEKW PVLASEEKFR GHVISIRTDT VKMVDGKVAE RDYVVHPGAV GVVALDEADR
VLLVRQYRHP VGWRLWELPA GLLDHPGENP LEAAKRELYE ETHQQADDWR VLVDLFTTPG
GSDEAIRVYL ARGVREADGE QYAREHEEAD MAAVWADRAE VTRLILAGEL HNPLTVAGVL
ALTTAISTNA LDDLRPADAP WRQRPFLP
|
|---|
| |