| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5401 |
|---|
| Symbol | |
|---|
| ID | 8336755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6226278 |
|---|
| End bp | 6227141 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644958499 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003116101 |
|---|
| Protein GI | 256394537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.295531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.262876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACCC CCGGAGCGGA CGCGGCAGCC GAGCAGGATC TCGATCCGGC CGAGGTCCGA
CAGGTCCTGA CGGCCGGTGA GCTGACCATC ACCGGCCGGA TCACCAACGC CTCCAACGCC
ACCTTGTACG GCACCGTGGC GCTGGACGGC GTGACCCTGA ACTGCGTGCA CAAGCCGGTG
GCCGGCGAGC GTCCGCTGTG GGACTTCCCC AACGGCACGC TGGCCTCCCG CGAAGTGGCC
GCCTACGAGC TGTCGCAGGC CACGGGCTGG CGCATCGTCC CGCCGACGGT GATGCGCGAG
GGCCCGTGGG GACCGGGCAT GTGCCAGCTG TGGATCGACA CCCCCGACGA GGACGACCAC
GACCTGCTCG CGCTGCTCCC GGAGGACTTC GACGACGACC CCGCCGACCA GACCGCGGCG
CAGTGGCGCC CGGTCCTGGC GGTGGAACTC GGCGACGGCC GCCCGGCGGT GCTGGCGCAC
AAGGCCGACG AGCGGCTGCG GCGCATCGCG GCGTTCGACG CGGTGGTGAA CAACGCCGAC
CGCAAGGGCG GCCACCTGCT GGTCGGGATC ACCGAGCCGG ACCACGTCTA CGGCATCGAC
CACGGACTGA CCTTCAACGT CGAGGACAAA CTGCGGACCC TGCTGTGGGG CTTCAGCAGC
GAGCCGCTGG GCGCCGAGGT CCGCGAGGTG CTGGAGCGGC TGGACCGCGA CATCGCCTCC
GGCGAGCTCC GCGGGCGCCT CGGCGGGCTG CTGCACGCCG GGGAGGTCGC GGCGACCCGG
GAGCGGATCA AGGAGCTGCT GGACACCGAC CGGATACCGG GACCTGAGGG GCGGCGGCGG
CCGGTGCCGT GGCCGCCGTT CTAG
|
|---|
| Protein sequence | MSTPGADAAA EQDLDPAEVR QVLTAGELTI TGRITNASNA TLYGTVALDG VTLNCVHKPV
AGERPLWDFP NGTLASREVA AYELSQATGW RIVPPTVMRE GPWGPGMCQL WIDTPDEDDH
DLLALLPEDF DDDPADQTAA QWRPVLAVEL GDGRPAVLAH KADERLRRIA AFDAVVNNAD
RKGGHLLVGI TEPDHVYGID HGLTFNVEDK LRTLLWGFSS EPLGAEVREV LERLDRDIAS
GELRGRLGGL LHAGEVAATR ERIKELLDTD RIPGPEGRRR PVPWPPF
|
|---|
| |