Gene Caci_5390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5390 
Symbol 
ID8336744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6214172 
End bp6214678 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content71% 
IMG OID644958488 
Producthypothetical protein 
Protein accessionYP_003116090 
Protein GI256394526 
COG category[S] Function unknown 
COG ID[COG4702] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.140829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAT CCACTCCGAG CGACAAACGG CTCGCCGACG ACCTTCTGGC CGAACGACTG 
CAGGCCCAAG AGGAACGCCT GGTCTTCGCC GCCTTCACCC ACGACGACGC CTGGACCCTG
GGCTCCCTGC TGGTCGACCT CGCCCGCGAG CGCGACCTCC CGGTCGCCAT CGACATCCGC
CGCGGCGACC AGCAGCTGTT CCACCACGCC CGCCCCGGCA CGGTCCCGGA CAACGCCACC
TGGATCGACC GCAAGGTCAA CGTGGTCCGC CGCTTCGGCC ACAGCTCGCT GCTGATCGGC
CAGCGCCACC GCGATCGCGG CACCACCTTC GAGGACGCCA CCGGCCTGCC CCGCGACACC
TACGCCGCAC ACGGCGGCGC CTTCCCCATC ACCGTCCCCG GCGCCGGCAT CATCGGCACC
GTCACCGTCT CCGGCCTGCC CCAGGTCGAC GACCACAACC TCGTCGTCGA AGCCCTGGAG
CGCTTCCTCG GCGACAACAC GGACTGA
 
Protein sequence
MSASTPSDKR LADDLLAERL QAQEERLVFA AFTHDDAWTL GSLLVDLARE RDLPVAIDIR 
RGDQQLFHHA RPGTVPDNAT WIDRKVNVVR RFGHSSLLIG QRHRDRGTTF EDATGLPRDT
YAAHGGAFPI TVPGAGIIGT VTVSGLPQVD DHNLVVEALE RFLGDNTD