Gene Caci_5343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5343 
Symbol 
ID8336697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6158651 
End bp6159874 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content74% 
IMG OID644958441 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_003116043 
Protein GI256394479 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.687168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CCAACGTCGT TCTCGGCGTG GGCGGCGGCA TCGCCGCGTA CAAGGCCTGC 
GAGCTGCTGC GGCTGTTCAC CGAGTCCGGG CACGGCGTCA CCGTCGTCCC CACCGCCTCC
GCGCTGCACT TCGTCGGCGA GCCGACGTGG GCCGCGCTGT CCGGGCGACC GGTGGCCACC
GAGGTCTGGG AGCGCGTGCA CGAGGTGCCG CACGTGCGCC TCGGGCGGCA CGCCGACCTG
GTCGTCGTCG CTCCGGCCAC GGCCGACCTG CTGGCCAAGG CGGCGCACGG CCTGGCCGAC
GACCTGCTGA CCAACACCCT GCTCACCGCG ACGTGCCCGG TGGTGTTCGC CCCGGCGATG
CACACCGAGA TGTGGGAGAA CGCCGCCACG CAGGAGAACG TCGCCACCCT GCGCCGCCGC
GGTCTGTACG TCATCGAGCC CGCCGTCGGC CGGCTGACCG GCGCCGACAC CGGCAAGGGC
CGGCTGCCGG ACCCCTCGGC GATCTTCGAG TACTGCCGGT CGCTGCTGGC GCGCGGGACC
GCCGAGCCGG ACCTGGCCGG GCTGCACGTG GTGGTCTCGG CCGGCGGCAC GCGCGAGCCG
ATCGACCCGG TGCGCTTCAT CGGCAACCGC TCCTCCGGCA AGCAGGGGTT CGCGCTGGCG
GGCACGGCTG CCGCCCGGGG CGCGCGGGTG ACGCTGGTCG CCGCCAACAC CTCGCTGGCC
GATCCGGCCG GGGTCGATGT GGTGCGGGTG TCGACGACCG CCGAACTGCG CACCGCGGTG
CGCGCCGCCG CGCGGGACGC GGACGTGGTC GTGATGGCCG CCGCGGTGGC CGACTTCCGG
CCTCGCGAGG CAGCCGAGGC CAAGATCAAG AAGGCCGACG ACAATTCGGC TCCCGAGATC
CGGCTGGTCC AGAATCCGCA CGTGCTGCGT GAGCTGGGTC ACTCCCGGTC GCGGCCGGGG
CAGACGGTGG TCGGGTTCGC CGCCGAGACC GGTGACGCGC AGGGGACGTG GCTGGAGCAC
GGCCGCGCCA AACTCGCCAA GTACGGCGTC GACCTGCTGA TCGTCAACGA GGTCGGGGTG
GACCTGACCT TCGGCGCCGA TCACAGCGCG GCGGTCGTGA TCGGCGCGGA CGGCTCGGAG
GAGCCGGTGG CCGACGGTCC GAAGGAGCGG CTCGCGGATG TGATCTGGGA CCGGGTACTT
AAGGTGCGCA CCCCCAACGA CTAA
 
Protein sequence
MPLPNVVLGV GGGIAAYKAC ELLRLFTESG HGVTVVPTAS ALHFVGEPTW AALSGRPVAT 
EVWERVHEVP HVRLGRHADL VVVAPATADL LAKAAHGLAD DLLTNTLLTA TCPVVFAPAM
HTEMWENAAT QENVATLRRR GLYVIEPAVG RLTGADTGKG RLPDPSAIFE YCRSLLARGT
AEPDLAGLHV VVSAGGTREP IDPVRFIGNR SSGKQGFALA GTAAARGARV TLVAANTSLA
DPAGVDVVRV STTAELRTAV RAAARDADVV VMAAAVADFR PREAAEAKIK KADDNSAPEI
RLVQNPHVLR ELGHSRSRPG QTVVGFAAET GDAQGTWLEH GRAKLAKYGV DLLIVNEVGV
DLTFGADHSA AVVIGADGSE EPVADGPKER LADVIWDRVL KVRTPND