Gene Caci_5304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5304 
Symbol 
ID8336658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6113350 
End bp6114126 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID644958402 
Producthypothetical protein 
Protein accessionYP_003116004 
Protein GI256394440 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGC GCACCGATGA GATCGCAGAG GGCATCTACC GGATCTCGAC CCATGTACCG 
GAGATCGCCC CGCCGGCGGG GTTCACGTTC AACCAGTTCC TGGTGGCCGC CGAGGAACCC
CTGATGTTCC ACACCGGCAT GCGCCACCTG TTCCCCGCGG TCGCCGCCGA GGTGAACCGC
ATCCTGCCGG TGGATACGCT GCGCTGGATC ACCTTCGGGC ACGTCGAGGC CGACGAGTGC
GGCGCGATGA ACGAGTTCCT CGCCGCCGCG CCGCATGCGC AGGTCGCCCA TCCCGCGCTC
GGCTGCCAGG TCTCGCTCGA CGACCTGGCG GACCGCCCGC CGCGGCCGAT GGCCGACGGG
GAGGTGATCG ACCTCGGCGG CAAGCGGGTG CGCAGCATCG ACACCCCGCA CGTCCCGCAC
GGCTGGGAGG CGCGCGTGTT GTACGAGGAG ACCACCGGCA CCCTGTTCTG CGGCGACCTG
TTCACCCACG TCGGCAACGG CCCGGCGGTC ACCGAGGACG ACCTCGTCGA TCCCGCGGTC
GAGGCCGAGG CGCTGTTCCG CGCCACCTCC TGCCTCACCG CGACGGTCGC CGCCCTGCGC
TCGCTGGCCG CGCTGCGACC GACGACGCTC GCGGTGATGC ACGGCTCCAG CTTCCGCGGC
GACGGCGCGG CGGCGCTGAC CGGCCTGGCC GAGGCGATGC ACACCCGGTT CAGCCCGGAG
GCCGGGTTCA TCGCGGTCCC GGACGTCGAG GGCGTGCACC GCGCCGACGG GTCCTGA
 
Protein sequence
METRTDEIAE GIYRISTHVP EIAPPAGFTF NQFLVAAEEP LMFHTGMRHL FPAVAAEVNR 
ILPVDTLRWI TFGHVEADEC GAMNEFLAAA PHAQVAHPAL GCQVSLDDLA DRPPRPMADG
EVIDLGGKRV RSIDTPHVPH GWEARVLYEE TTGTLFCGDL FTHVGNGPAV TEDDLVDPAV
EAEALFRATS CLTATVAALR SLAALRPTTL AVMHGSSFRG DGAAALTGLA EAMHTRFSPE
AGFIAVPDVE GVHRADGS