| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5296 |
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| Symbol | |
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| ID | 8336650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6100538 |
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| End bp | 6105106 |
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| Gene Length | 4569 bp |
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| Protein Length | 1522 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958394 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115996 |
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| Protein GI | 256394432 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAACG CCGAGCGCCG CGACGCGCGC GAGAGCAGGA CCGGCGATGG CGCCGGTGAG
ACGACGAGCG ATATAGGCAC GATTAAGAGC ACGAACGGTA CTAACGGCGC GAAGAACACG
ACGAGCGCCG AGGACTTCAC GACGACCAGC AGTGGCGCCG GCGATGGCGC GAACCCTGGC
ACGGTAGGTG GCGCCTACAA GACCACCGAC ACCGCAGGCT CCTTGAGCGC CGACGAGAAC
GGCGACATCG CGGACGCGAA CCAGGCACGT AGCGCCGGCA AGAACGGCAC CGTTGCGGAT
GCTGGCCATG CACATGGCGC CGACGAGAAC GGCGACACCG CGGACGCGAA CCGGGCACGT
AGCGCCGACA AGAACGGCAC CGCTACGGAC GCCGGTCAGG CACGCGGCGC CGACAAGACC
ACCGACGTCG CTGGCTCCTT GAGCGCCGGC AAGAACGGCA CCGCTGCGGA CGCTAGCCAG
GCACACGGCG CCGACGAGAA CGGCGACACC GCCGACTCTC TGAGCGCCGG CAAGAACGGC
ACTGTTGCGG ACCCCGGTCA GGCACGCGGC GCCGCCAAGA CCACCGACCC CGCCGACTCC
CCCCGCCCCG ACAGCACCGG CAAGGGTGAC GCGCCCTCCA GTTCCTGGAT GCGGCGGCTG
GCGGCGGCGA GTTGGGTGTA CCGGCGGAGT GTGCTGGTTG CGTTGGGTGG GTCGTTGATG
GCGATGCTGG CTACTGCGGC TATGCCGTTG GTTCAGCGGC ACATTATTGA TGATGTCGTC
ATTTCGCGGC GGTCGGCTTT GGCGCCTTGG GCGGCTGTGG CGTTGGTGTT GGCGGTGGTG
AACTTCGGTG GGACGCGGTT GCGGCGGTAT GTCGGTGGCA AGTTGTCGCT GGATGTGCAG
TATGACTTGC GGAATCGGAT TTTTGGGGCG CTTTCGCGGT TGGATGGGGC TCGGCAGGAT
GAGCTGGCTA CTGGGCAGCT GATTTCGCGG GCTACGTCTG ATGTCACCAT GGTGCAGGGT
TTGCTGGGCA TGTTGCCGAT GTTGATCGGG AACGCGTTGT TGTTCGTGGT CGCGTTGACG
GTGATGGCGT TTCTGTCGCC GCTTTTGACG CTGGTGGCGT TGGCTACCGG GCCGGGGTTG
TGGTTCGTGG CGGTGGCGGC TCGGCGGCGG CTTTATCCGG CGACGTGGGA GGCGCAGCAG
CAGGCTTCGG CGTTGGCCGG GGTGGTGGAT GCCGCGGTCG GCGGTGTGCG GGTGGTGAAG
GGGTTCGGGC AGGAGGAGCA GGAGCTCGGC AAGTTGGAGG CGGCCGGGGA GCGGTTGTTC
GCCTCGCGGC TGCGGGCGGT GCGGTTCTCG GCGCGGTACA ACCCGGCGAT CATGGCGATT
CCGGCGCTGG GGCAGGTCGG GGTGTTGTTC CTCGGCGGGT GGCTGGCGCT TCGGGGGATG
ATCACGCTGG GGACGTTCCT GGCGTTCTCC ACGTACCTGG CGCAGATGCT CGGTCCGGTG
CGGATGCTGT CCTCGCTGGT GACCATCGGG CAGCAGGCGC GGGCCAGTGT GGAGCGGATC
TTCGAGATCA TCGACTCCCA GCCGAAGGTC ACCGAGAAGC CGGACGCCGC GGTGCTGCCG
CGCGAGACCT CCGGGGTGGA GTTCGACGGC GCGGTGTTCG GCTACGTCGC CTCCCGGCCG
GTGCTGCGCG GCCTGGATTT GAAGGTGCGT CCCGGGGAGA CCGTGGCGCT GGTGGGGACC
TCCGGCTCCG GCAAGTCCAC GGTGTCGATG CTGCTCCCCC GCTTCTACGA CGTGCAGGGC
GGTTCGGTGC GGGTCGGCGG CGCCGACGTG CGCGAGGTGA CCCTGGAGTC GCTGCGCGCG
GCGATCGGGC TGGTGATGGA GGACAGCTTC CTGTTCTCCG ACTCGGTGCG CGCCAACATC
GCCTACGGGC GTCCCGACGC CACCGACGAG CAGGTGCGCG CCGCGGCGCG GATGGCCGAG
GCCGACGAGT TCGTCGAGCA GCTGCCGGCC GGCTACGACA CCGTGGTCGG CGAACAGGGC
CTGACCCTGT CCGGCGGCCA GCGCCAGCGC ATAGCCCTGG CCCGGGCCCT GATCACCGAT
CCCCGGGTCC TGATCCTGGA CGACGCCACC TCCGCGGTGG ACGCCCGCGT GGAGGCGGAG
ATCCACGACA CGCTGCGCCG GGTGATGGCC GGGCGCACCA CGCTGCTGAT CGCGCACCGG
CGCTCCACGC TGGCGCTGGC CGACCGGATC GCGGTGCTGG ACCGCGGCCG CGTCGTCGAC
ATCGGCACGC ACGAGGAGCT CACCGAGCGC TGCCCGCTGT ACCGGCTGCT GCTGTCCGGG
CCCGGCGAGG ACGCCGAGGG CATCGACGCC GGCGACCTGA CCACGGCGGC GACAGCGCGT
GCGAAGGCTG CGAACGGCAG CCCGGCGGTC GCACTCCACG GCAGCGCGAA CGGCACTGCC
AGCAACGGCC ACGCCCCCGG CACCGACCGC ACCGACGCCA CCAGCACCAT CGAAGCCCAG
GTCGACGGCA TCACTCCGAG CCTGTGGCCC TCCGTCGAAG GCGACGACGG CCCGGCCGGC
GCCAAGGGCT CCGGTACCGG GGCGCTGCCC GGCATGGGTG GCGGAGGCGG CGCAGGACGC
GGCGTCGGCG GCGGAGGGGG CGGCGGTTTC GGCGGCTTCC TGGCCTCGAT GCCCCCGACC
CCGGAACTGC TGGCGAAGGT CGCGGCGCTG CCGCCGGCGA CCGACGAGCC CAAGGTCGGC
CAGGCCGAGG CCCGTGCTTC GGACCCCGAC TTCTCCCTGC GCAAACTGCT GCGCCCCTTC
CGGCTGGCGC TGCTGCTCGG GCTGCTGCTG GTCGCCGCGG ACACCGCGGC CGGGCTGGCG
CTGCCGGCGC TGATCCGCGG CGGCGTGGAC CGGGGCATCC TGGCGCACTC GCTGTCGGCG
ATCGTCGGGG TGTCGGTGGC GGCGCTGCTG GTGACGCTCA CCGACAGCGC GATCAACGTC
TGCCAGTACC TGGTCACCGG ACGCACCGGC GAGCGCCTGC TGTACGCGTT GCGGGTGAAG
GTGTTCGCGC AGTTGCAGCG CCTGGGTCTG GACTACTACG AGCGCGAGCT GTCCGGGCGC
ATCATGACCC GCATGACCAC CGACGTGGAC GCGCTGTCCA CGTTCCTGCA GACCGGTCTT
CAGCAGGCGG TCGTCAGCGT CCTGTCGTTC GTCGGCATCG TGGTGGCGCT GGTGGTGATC
GACTGGCGGA TGGCGCTGAT CGCGCTGAGC GTCCTGCCGC CGCTGCTGAT CGCGACCGCG
GTGTTCCGCG CCAAGTCCAG CAAGGCCTAC ACCGAGGCGC GCGAGAAGGT CGCGGCGGTC
AACGCCGACC TGCAGGAGAA CGTCGCCGGC ATGCGCGTGA CGCAGGCGTT CCGGCGTGAG
GGGACCAACG CGACGCGGTT CGCCGGGCTG TCGGACGAGT TCCGCGTCTC GCGGCTGCGC
GCGCAGAAGT ACATCGCGAC GTACTTCCCG TTCGTGCAGC TGCTGGCCGA CGTCGCCGGG
CTGCTGGTGC TGGCCGCCGG CGCCTCCCGG GTGCACTCCG GGGAGCTGAC CGCCGGCGCG
CTGATCGCCT ACCTGCTCTA CATCGACATG GTGTTCTCGC CGGTGCAGCA GCTCTCGCAG
GTGTTCGACG GCTACCAGCA GGCCGCGGTC GGGCTGCGCC GGATCGGCGA CCTGCTGCGC
ACCGCGCCGT CCACGCCGGA GCCGGCGCGG CCGGTACCGG TCCCGACGGG GCTCGGCGAG
ATCGTGTTCG ACGACGTCAC CTTCGCCTAC GGTCCGGACA CCCGGCCGGC GCTGGAGAGT
GTCAGCGTGC GCATTCCCGC CGGGCAGACG GTGGCGCTGG TCGGGCAGAC CGGCGCGGGC
AAGTCGACCT TCGTGAAGAT GGTCGCGCGC TTCTACGACC CGACCGGCGG CGCGGTCACC
GCCGGCGGCC GCGATCTGCG CGAGTTCGCG CTGCCGGACT GGCGGCACCG GCTCGGCGTG
GTCCCGCAGG AGGCGTACCT GTTCGACGGG ACCGTCGCCG AGGCCATCGC CTACGCGCGC
CCGGACGCCC CGCCCCGGGA GATCGAGGCG GCGGCCCGCG CGGTCGGCGC CGAGGAGATG
ATCGCGGGGC TGCCCGAGGG GTTCCACTCC CGGGTGGCCG AGCGCGGCCG GAACCTGTCG
GCCGGACAGC GCCAGCTGCT CGCGCTGGCC CGCGCGGAGC TGGCGGATCC GGACGTGCTG
ATCCTGGACG AGGCGACCTC CTCGCTGGAC CTGGCCACCG AGGCCGCGGT CACGCACGCC
GAGCTGGCGC GCTCCGCCGA CCACGGCGCG GCCGGGCGGA CCCGCACCAC GCTGGTGGTG
GCGCACCGGC TGACCACGGC GGCGCGCGCC GACCGGATCC TGGTGCTGGA CGGCGGGCGG
ATCGTGGAGG ACGGGACGCA CACGGAGTTG GTCGAGCGCG GCGGGACGTA CTCCGCGCTG
TGGGAGGCGT TCGCCGCCGG GCATGAGGAC GGCGAGCGGG AGACCGAGAC TGCGGGAGTG
GCTATATAG
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| Protein sequence | MTNAERRDAR ESRTGDGAGE TTSDIGTIKS TNGTNGAKNT TSAEDFTTTS SGAGDGANPG
TVGGAYKTTD TAGSLSADEN GDIADANQAR SAGKNGTVAD AGHAHGADEN GDTADANRAR
SADKNGTATD AGQARGADKT TDVAGSLSAG KNGTAADASQ AHGADENGDT ADSLSAGKNG
TVADPGQARG AAKTTDPADS PRPDSTGKGD APSSSWMRRL AAASWVYRRS VLVALGGSLM
AMLATAAMPL VQRHIIDDVV ISRRSALAPW AAVALVLAVV NFGGTRLRRY VGGKLSLDVQ
YDLRNRIFGA LSRLDGARQD ELATGQLISR ATSDVTMVQG LLGMLPMLIG NALLFVVALT
VMAFLSPLLT LVALATGPGL WFVAVAARRR LYPATWEAQQ QASALAGVVD AAVGGVRVVK
GFGQEEQELG KLEAAGERLF ASRLRAVRFS ARYNPAIMAI PALGQVGVLF LGGWLALRGM
ITLGTFLAFS TYLAQMLGPV RMLSSLVTIG QQARASVERI FEIIDSQPKV TEKPDAAVLP
RETSGVEFDG AVFGYVASRP VLRGLDLKVR PGETVALVGT SGSGKSTVSM LLPRFYDVQG
GSVRVGGADV REVTLESLRA AIGLVMEDSF LFSDSVRANI AYGRPDATDE QVRAAARMAE
ADEFVEQLPA GYDTVVGEQG LTLSGGQRQR IALARALITD PRVLILDDAT SAVDARVEAE
IHDTLRRVMA GRTTLLIAHR RSTLALADRI AVLDRGRVVD IGTHEELTER CPLYRLLLSG
PGEDAEGIDA GDLTTAATAR AKAANGSPAV ALHGSANGTA SNGHAPGTDR TDATSTIEAQ
VDGITPSLWP SVEGDDGPAG AKGSGTGALP GMGGGGGAGR GVGGGGGGGF GGFLASMPPT
PELLAKVAAL PPATDEPKVG QAEARASDPD FSLRKLLRPF RLALLLGLLL VAADTAAGLA
LPALIRGGVD RGILAHSLSA IVGVSVAALL VTLTDSAINV CQYLVTGRTG ERLLYALRVK
VFAQLQRLGL DYYERELSGR IMTRMTTDVD ALSTFLQTGL QQAVVSVLSF VGIVVALVVI
DWRMALIALS VLPPLLIATA VFRAKSSKAY TEAREKVAAV NADLQENVAG MRVTQAFRRE
GTNATRFAGL SDEFRVSRLR AQKYIATYFP FVQLLADVAG LLVLAAGASR VHSGELTAGA
LIAYLLYIDM VFSPVQQLSQ VFDGYQQAAV GLRRIGDLLR TAPSTPEPAR PVPVPTGLGE
IVFDDVTFAY GPDTRPALES VSVRIPAGQT VALVGQTGAG KSTFVKMVAR FYDPTGGAVT
AGGRDLREFA LPDWRHRLGV VPQEAYLFDG TVAEAIAYAR PDAPPREIEA AARAVGAEEM
IAGLPEGFHS RVAERGRNLS AGQRQLLALA RAELADPDVL ILDEATSSLD LATEAAVTHA
ELARSADHGA AGRTRTTLVV AHRLTTAARA DRILVLDGGR IVEDGTHTEL VERGGTYSAL
WEAFAAGHED GERETETAGV AI
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