| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5285 |
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| Symbol | |
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| ID | 8336639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6089896 |
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| End bp | 6091371 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958383 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003115985 |
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| Protein GI | 256394421 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCA CGTCCCGTTC ACCAGCGCAG TACGCCACCT CTCCCGCCGA GACCGCACCG
AAGCGCGGTC TGATGCTGGT GATGGTGCCG CTGATGCTGG TCCTGTTCAT CTCCAACCTG
GACGCCACCG TCGTCGCCAC CGCGATCCCG ACCATCGGCC GGGACCTCGG CGACGTCTCC
GGCTCCTCCT GGATCGCCAC CGCCTACCTG CTGACCAGCG CGGTGACCAC GCTGATCTTC
GGCAAGCTCG GCGACATGTA CGGCCGGAAG AAGATCTTCC AGTTCTCGAT CGTGGTGTTC
CTGGTCGGCT CCGCACTGTC CGGCGCGGCG GGGAGCATGG CGTTGCTCGT GCTGTTCCGC
GCGCTGCAGG GCATCGGCGG AGGCGGCCTG AACTCCCTGG TCATGGCCAT CACCGGCGAC
CTGATCCCGG CTCGGCAGCG CTCGAAGTAC CAGGCGCTGG TCGGCATCGT GGCGACTCTG
GCGCTGATCG CCGGACCGCT GCTCGGCGGC CTGTTCTCCG ACCAGTTGTC CTGGCGCTGG
ATCTTCTACC TCAACATCCC CATCGGCGTG CTCGCGCTGG TCGCCGTCGC CACGCTGCTG
CACCTGCCGC GCCGCACGTC CAGCGGACGG GTCGACGTCG CCGGGGGCGT GCTGGCCACG
GTGTTCACCG CCGCGATCAT GCTGTTCACG ACCTGGGGCG GGACCGAGCG GCCGTGGGGT
TCGCCGCTGA TCCTGGGGCT GATCGCGCTG GCGGTGGTGA GCCTGATCGG CTATCTGCTG
GTCGAGCGGC GGGCCGCGGA GCCGATCACG CCGCTGCACT TGTTCCGGAC CGGCGTCTTC
AGCATCTCCT CGGCGCAGTT CCTGATCGCC ACAATGGTGC TGTTCGTCGC GATGCTGTAC
ACGCCGGCGT TTTTGCAGAG CGTGCAGCAC AAGACCGCGT TCGTCGCCGG GCTGTACGTC
ATCCCGCTGC TGGTGGGGCT GGTCGTGGCG ACGGCTGTCG CAGGGCCCGT CATCGCCAGG
ACCGGCCGGT ACAAGATCTA TCCGATCATC GGGGCGGTGC TGACCGGGGT GTCCATGTTC
GCGCTCACCT CCGCCGACCA GCACACGGCG ACCTGGGCGC TGCTCGTCCC GCTGACCTTC
GCCGGCGCCG GTATCGGACT GTTCGTGCAG GTCGCGCTGC TGGCCGGGCA GAACGCCGTC
GACTACAAGT ACTTGGGTGT GGCGACCGGG GCGCTGAACT TCTTCAAGAG CATCGGCGGA
GCCTTCGGCG CGGCGCTGTT CGGCGCGATC CTCACCGGCG GGCTCCGGGA CGCGGTCGGC
GAGGGCGCGA GCGCGCACGC GTTTCAGACC GTGTTCGCCT GGACCGTGCC GTTCATGGTG
CTGTCGCTGG TCCTGGGGTT GGTCATGAAG GAGAAGCCGC TGTCCGACGA GATGCGCGAG
ATCGCCGAGG GCAAGGCTGA GGCGCCGGAG TACTGA
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| Protein sequence | MSTTSRSPAQ YATSPAETAP KRGLMLVMVP LMLVLFISNL DATVVATAIP TIGRDLGDVS
GSSWIATAYL LTSAVTTLIF GKLGDMYGRK KIFQFSIVVF LVGSALSGAA GSMALLVLFR
ALQGIGGGGL NSLVMAITGD LIPARQRSKY QALVGIVATL ALIAGPLLGG LFSDQLSWRW
IFYLNIPIGV LALVAVATLL HLPRRTSSGR VDVAGGVLAT VFTAAIMLFT TWGGTERPWG
SPLILGLIAL AVVSLIGYLL VERRAAEPIT PLHLFRTGVF SISSAQFLIA TMVLFVAMLY
TPAFLQSVQH KTAFVAGLYV IPLLVGLVVA TAVAGPVIAR TGRYKIYPII GAVLTGVSMF
ALTSADQHTA TWALLVPLTF AGAGIGLFVQ VALLAGQNAV DYKYLGVATG ALNFFKSIGG
AFGAALFGAI LTGGLRDAVG EGASAHAFQT VFAWTVPFMV LSLVLGLVMK EKPLSDEMRE
IAEGKAEAPE Y
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