| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5273 |
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| Symbol | |
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| ID | 8336627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6072278 |
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| End bp | 6073039 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958371 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_003115973 |
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| Protein GI | 256394409 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.408646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGCAG AGGAACGACA GCAGGCGATC TTGCACAAGG CGCGCCTCGA CGGCCGCGTG
GACGTCGTGG TCCTCGCCGA GGACCTGACG GTCACCACCG AGACGATCCG CCGGGACCTG
ACGGCCCTGG AACGGGCCGG CCTGGTGCGC CGGGTGCACG GCGGGGCGAT CCCGGTCGAG
CGCCTGGGCT TCGAACCCGC GCTGGCCGTG CGGGACCAGA GCATGACCGC CGAGAAGGAG
CGCATCGTCA AGGCGGCGCT GGCCGAGGTC CCGCAGGAGG GCGCGATCAT CATCGACGCC
GGCACGACCA CCGGCCGGCT GGCCTCGGCA CTGCCGGCCG ACCGCGAGCT GACCGTCGTG
GTGAACGCCC CGGCGCTGGC CGCGCAGCTG GTCGCCCGGC CGAATCTCAC GGTCCTGATG
CTCGGCGGCC GGATCCGCGG CCGCACCCTG GCCGCGGTGG ACGAGTGGGC GCTGGCTCCC
CTGTCGCAGC TGTGTGTGGA CGTGGCCTTC CTGGCGACGA ACGGAGTCTC GGTGGCGCGC
GGACTGACCA CCCCGGATCT GGCGGAGGCG GCGGTGAAGC GGGCGATGAT CGGCGCCGCC
CGGCGCACCG TGCTGCTGGC CGACCACACC AAGGTCGGCA ACGACTGCAT GGCGCGCTTC
GGCGGCCTGG ACGACGTCGA CCTGTTCCTC ACCGACTCCG GTCTGGACGA GGAGACCGCC
GCCGATTTCG GCGCCGCCGG GGTGCGGGTG GTCCGGGCAT GA
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| Protein sequence | MYAEERQQAI LHKARLDGRV DVVVLAEDLT VTTETIRRDL TALERAGLVR RVHGGAIPVE
RLGFEPALAV RDQSMTAEKE RIVKAALAEV PQEGAIIIDA GTTTGRLASA LPADRELTVV
VNAPALAAQL VARPNLTVLM LGGRIRGRTL AAVDEWALAP LSQLCVDVAF LATNGVSVAR
GLTTPDLAEA AVKRAMIGAA RRTVLLADHT KVGNDCMARF GGLDDVDLFL TDSGLDEETA
ADFGAAGVRV VRA
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