Gene Caci_5254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5254 
Symbol 
ID8336608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6049623 
End bp6050807 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID644958352 
Producthypothetical protein 
Protein accessionYP_003115954 
Protein GI256394390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.580561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGG GGGACCGGGG ATACGCAGAT GACGACGACC GACGCCGCCG CCGCGTGCTC 
ACGCGCCGAC CACCCGCGCC GCTGCCGCCG CGGCGTCCGC CCGCGCCGCC GCGTCGCATA
TCCCTGATCT GGCGGCTGCG CCCGCCGCTG GCGCTGCGCG GACGCCGCGC CCCGGACCCG
CGCTGGATCA TCGGGCTCTT CGTCGGCCTG GCGGCGATCC TCACGCTGAG CTGGATCGGC
CGCACCGTCG CGCCGTACTG GCCGAACTTC GCGCTGAACA CCGCCGCGGA CCTGATCGGC
GCGGTGTTCA CCATCTACGT GATCACCCCG ATCATCGAGC GCGCCGGGCA GGGCGGCGTC
CGGGAGCACG CCGAGCTGGA CTACTCGCAG TTCCTCGGCA GCGCCGACCG CGCGACCAGC
GTGATCCGCA TCCTGGACAC CTACTCCAAC CTGCTCGCCG AGCCCTACGC GCAGCGCTTC
GAGACGATGG TGCGCGAGGC GGTGGCGCGC GGGGTGTCCA TCAGGGTCCT GCTGATCAAC
CCGACCACCC TGGCCGCCGA GCAGCGCGAC CTGGAACTGG GCCGCGCCGA CGAGCTGGGC
CCGATGCTGG AGCGCAATCT GGAGACGGTG GCCCGGCTGC ACCGCGCCTT CGAGCAGGAG
GGCGGCCCGC GCGGGCTCGG CGCCGCCGCC GACTTCCAGG TGCGGCTGTA CTCCTCCGGT
CCGGACATCA CCATGTACCG CTGGGACGAC CGCGCTCTGG TGTCGTTCTA CCCGGTCGGC
AAGCTGTCCG GGCGCGCCGA GCAGCTGGAG GTCACCGTCG ACAGCGCGCT GGGGTCCTTC
GTCAACAACC GCTTCCAGGC GGTCTGGCAC GCCGCCGCGC CACACCAGGC GCTGACCCCG
ATCACCGTCG CCGACGGCAA TATCGAGCGC ACGTACCTGG TCCGCTTCGT CGACCTCGAC
GGCCGTCGCT TCGTGGCCTC CCGCCGCGTC GAGCGCTTCA TGCGGCGGGC CGTCGGCGAG
ATCTCGGCGG TCAACGGCGG CCGGGACTAC CGGCTGGAGC CCGCCGACCG GAGCCAGGTC
GGGGCGCTGC TGGACGCCGC CTTCCGCAGG GTCTACGGGG AGATCCCCGA CACGGCCTAT
CTCCTGCTGC GAACCTCGGA TCCATCGGTC ACCGCCGCCG TGTAG
 
Protein sequence
MALGDRGYAD DDDRRRRRVL TRRPPAPLPP RRPPAPPRRI SLIWRLRPPL ALRGRRAPDP 
RWIIGLFVGL AAILTLSWIG RTVAPYWPNF ALNTAADLIG AVFTIYVITP IIERAGQGGV
REHAELDYSQ FLGSADRATS VIRILDTYSN LLAEPYAQRF ETMVREAVAR GVSIRVLLIN
PTTLAAEQRD LELGRADELG PMLERNLETV ARLHRAFEQE GGPRGLGAAA DFQVRLYSSG
PDITMYRWDD RALVSFYPVG KLSGRAEQLE VTVDSALGSF VNNRFQAVWH AAAPHQALTP
ITVADGNIER TYLVRFVDLD GRRFVASRRV ERFMRRAVGE ISAVNGGRDY RLEPADRSQV
GALLDAAFRR VYGEIPDTAY LLLRTSDPSV TAAV