Gene Caci_5252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5252 
Symbol 
ID8336606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6047365 
End bp6048612 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content71% 
IMG OID644958350 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003115952 
Protein GI256394388 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCG CCGTGACCAC GTCTGCGGGT TTCCCGAGTG AATCAGGGTC CGAATCAAGG 
CCCGAGTCGG CGCGCGAATC AGCACCCGAT GTCCTGGCGC CGGCGACCCT CGGCCCGGTT
CGCCTGCGCA ACCGGATCAT CAAGTCCGCC ACCTTCGAGG GCGCCACCCC CGACGCCCTG
GTCACCGACG ACCTCATCGC CTACCACCGC CGCCCGGCCG CCGGCGGCGT GGGCATGACC
ACGGTCGCCT ACCTCGCCGT CAGTCCGGAA GGACGTACCG AGCGCCGCCA GATCCACTGG
CGCCCCGAAG CCGTGCCGGG ACTGCGCACC CTGACCGACG CCGTCCACGC CGAGGGCGCC
GCCGTCGCCG CTCAGATCGG GCACGCAGGG CCCGTCGCCG ACGCGCGCTC CAACCGTGCC
GCGGCCCTGT CCTGCTCGCC GATGCTGAAC CCGGTCACCT TCCGCCGCAC CCGCGCCGCG
ACCGCCGCCG ACATCGAGCG GATCACCGCC GCCCACGCCC GCGCAGCTCG CCTGGCGATC
GAATCAGGGT TCGACTCCGT CGAGATCCAC CTCGGCCACA ACTACTTCGC CAGCGCCTTC
CTGTCTCCGC GCCTGAACAA GCGCGACGAC CAATTCGGCG GCTCGCTCGC CAACCGCGCC
AAGGTCGCGC TGGGCTTGGC GCGCGCCGTC CGCGACGAGG TCGGCGACCG GATCGCGGTG
ACCGCGAAGC TGAACATGGA GGACGGCTAC CCCGGCGGAC TGCGCATCGA GGACAGCTTG
CAGGTCGCGC AGTGGCTGCA GCGCGACGGC ACCCTCGACG CCCTGGAACT GACCGCCGGC
AGCTCCCTGA TGAACCCCAT GTATCTGTTC ACCGGCGATG TGCCCCTGCG CGAGTTCGCG
GCGCAGTTCC CGCCGTTGCC GCGCCTGGGA ATCCGCTTGT TCGGCAAGAA GTTCCTGCGC
TCCTACCCCT ATCAGGACAC GTATCTGATG GAGCGCGCCC TGCGCTTCCG TGCCGAGCTC
TCCCTCCCGC TGATCCTGCT CGGCGGCGTC ACCACGCGCG CCACCATGGA CCGCGCGATG
GCCGCCGGCT TCCAGTACGT GGCGATGGCG CGTGCCCTGC TGCGTGAGCC GGATCTGGTC
AACCGCATCG CCGCCGACGC CACCACGCCG TCGGCATGCA CCCACTGCAA TCGATGTATG
CCGACCATCT ACACCGGGAC GCGGTGCCCC GAGATCAGCC GACCCTGA
 
Protein sequence
MVRAVTTSAG FPSESGSESR PESARESAPD VLAPATLGPV RLRNRIIKSA TFEGATPDAL 
VTDDLIAYHR RPAAGGVGMT TVAYLAVSPE GRTERRQIHW RPEAVPGLRT LTDAVHAEGA
AVAAQIGHAG PVADARSNRA AALSCSPMLN PVTFRRTRAA TAADIERITA AHARAARLAI
ESGFDSVEIH LGHNYFASAF LSPRLNKRDD QFGGSLANRA KVALGLARAV RDEVGDRIAV
TAKLNMEDGY PGGLRIEDSL QVAQWLQRDG TLDALELTAG SSLMNPMYLF TGDVPLREFA
AQFPPLPRLG IRLFGKKFLR SYPYQDTYLM ERALRFRAEL SLPLILLGGV TTRATMDRAM
AAGFQYVAMA RALLREPDLV NRIAADATTP SACTHCNRCM PTIYTGTRCP EISRP