Gene Caci_5211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5211 
Symbol 
ID8336565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5988576 
End bp5989643 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content71% 
IMG OID644958309 
Producthypothetical protein 
Protein accessionYP_003115911 
Protein GI256394347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.159445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCA CGCCCCGACC CCGCGCCAGA ACCAGAGTCA GAACCAGAGT CAGCACCAGA 
ACCAGAATCC GAACCAGAAC CCGCGCCACC GCGCTGATCA CCTGCACCGC AGCCCTCTGC
CTCACCGCCA CCGCCTGCGG ACACAGCCCC AAGAAACCCG CCGCCAGGAC CGCGCCGACC
GGAACCCCCG CGGCATCCTC CCCGGCGAAC GCCGTCTCCC CGCTGACCGG CCTGCCCGGC
CCAACCGGCA AGATCCTCGC CGCCAAGATC GACAACATCG CCTACGCCCG CCCCCAAACC
GGCCTGGCCG CCGCCGACGT CGTCTACGCC ATCGAAGTCG AGGGCGGCCT GTCGCGCTTC
CTGGCCGTCT ACGACTCCGA CCACCTCCCC GCCGGCAAGA TCGGCCCGAT CCGCAGCGCC
CGCGAAAGCG ACCTGCCGAT CCTGGAGCAG TACGGCAAGG TCGACTTCGC CTACTCCGGC
GCCCTCAGCG TGTTCCTGCC GGTGCTGGCC TCCGCGAACA TCGTCAACAC CAGTCCCGAC
CAGGACGGCG CCGCCTTCTC CCGCGACAGC GCCCGCAGCG CCCCGTACAA CGAGTACCTC
AATCCCGCCA AGGTGCTCGC CGACTTCCCC ACCACCGCTG CCGCCAAGGA CATCGGCTTC
CGCTTCGGCG CCGCGCCGGC CGGGGGCATC CCGACCGCGA GCCTCACCGC GCGCATGCCC
TCGGCGTCCT TCACCTTCAC CTGGGACGCC AGCCGGGGCG AGTACCTCAT CGCCATGGAC
GGCCACGCCG CCTCCACCAC CGACGGCGGT CCGCTGTGCG CGCCGACCAT CGTGCTGCAG
AAGGTCGCCG AGACCACCTC GCCGCGCGGG TTCCACGACG TGCCCGACCA GCTCTCCCCG
TACGCCCCGA CCGTCGGCAC CGGCAAGGCC GTGGTCCTGC GCGACGGCGA CTCCTACACC
GGCACCTGGT CCCGCCCGAC CGACGCCAGC CCGACCAGCT TCACGTTCGA CGGCCAGCCG
ATGACCTTCC ACCCCGGCCA GGTGTGGATC GTCCTCACGC CGCAGTAG
 
Protein sequence
MRLTPRPRAR TRVRTRVSTR TRIRTRTRAT ALITCTAALC LTATACGHSP KKPAARTAPT 
GTPAASSPAN AVSPLTGLPG PTGKILAAKI DNIAYARPQT GLAAADVVYA IEVEGGLSRF
LAVYDSDHLP AGKIGPIRSA RESDLPILEQ YGKVDFAYSG ALSVFLPVLA SANIVNTSPD
QDGAAFSRDS ARSAPYNEYL NPAKVLADFP TTAAAKDIGF RFGAAPAGGI PTASLTARMP
SASFTFTWDA SRGEYLIAMD GHAASTTDGG PLCAPTIVLQ KVAETTSPRG FHDVPDQLSP
YAPTVGTGKA VVLRDGDSYT GTWSRPTDAS PTSFTFDGQP MTFHPGQVWI VLTPQ