| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5207 |
|---|
| Symbol | |
|---|
| ID | 8336561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5983763 |
|---|
| End bp | 5984581 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644958305 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003115907 |
|---|
| Protein GI | 256394343 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.284913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.803536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTACTG CGGTAACTTC GGAATGCGCA CCGCCGGTCG AATACGCGGT CGCGGTCGAA
CGCTTCCTGG TGTCCGCGGG CTTGAGCACC GCTTCGCAGC GGATTTATCG CATAGCCCTG
ACCACCTGGT CCTGGATGCT CGTCGAGCGT GAATCCCCGG TCGGCGCCGC CCGCCGGGGC
GCGGCGGCGC CGGTGGTCCC GCTCGGGCTG CTCGACAGCG CGACGGCACC GTCCCGCCTC
GAAGCCGGAT TCGCTGCACG GGAGGCGGCC GTCGGCGCCC GCACCGCGAA CCGCGAACTG
GCGATCCTGC GCAGCGCCCT GTCATGGTGG CGCGCCCGGG AATGGGTCAC CTCCGACCCC
ACCTCCGCGA TCCGCCGGCG GATCGCGACC GCTCCGAGCA TCGAAACGCT CACCGACGAC
CAGGCGCGCG CCGTCCTGCG GCTCCGCGCG CCCCTGCGCG AACAAGCCCT GTGGCACGCG
GTCTACGACA GCGGCGGCGG CATCGAACGC ATCCTCGCCC TCGACGTCCC GGACCTGGAC
CCGAACGGCC GCCGCACCCG CCCCCGCCTA CCCGGCGAAC CACTGCACTG GCGCGCCGCC
ACCGGAACCC TGCTGGCCCT GCTGGCAGCG GGCCGCCCCT CCGGACCACT GTTCCTGACC
GACCGGCGCG CGCCCGCCGA CACCCTCGCC CGCGACCGGT GCGCGGTGAC CGGACGCGGA
CGCCTGTCCT ACCGCCGCGC AGCCGAGCTG TTCACGGCGG CGACGCAAGG GCTTGATACA
GCGGGGCGGG GATGGACCCT CCGTCAGCTG CGCCGGTGA
|
|---|
| Protein sequence | MFTAVTSECA PPVEYAVAVE RFLVSAGLST ASQRIYRIAL TTWSWMLVER ESPVGAARRG
AAAPVVPLGL LDSATAPSRL EAGFAAREAA VGARTANREL AILRSALSWW RAREWVTSDP
TSAIRRRIAT APSIETLTDD QARAVLRLRA PLREQALWHA VYDSGGGIER ILALDVPDLD
PNGRRTRPRL PGEPLHWRAA TGTLLALLAA GRPSGPLFLT DRRAPADTLA RDRCAVTGRG
RLSYRRAAEL FTAATQGLDT AGRGWTLRQL RR
|
|---|
| |